| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4535 |
|---|
| Symbol | |
|---|
| ID | 5106993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 4970755 |
|---|
| End bp | 4971399 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640505806 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001190014 |
|---|
| Protein GI | 146309549 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGCCC TGCAGTTGCC GAAGCTCTCC CGGCAGGTGC TGGGCGAGGA TATTCAGGTG
CTTGGCGAGG TGCTGCGTGA CGGCGTCAAC CTGGCCATCT GGCAGCGCCG CCTGCCGGCG
CAGATCGCCG ACTTCGCCGA CGCGCTGCTG GCCCAGGGCG AGCCCCTGGC GCACTCCATG
ACCCTGGAGC TGCCGCGTGC CGACAGCGAG CCGAACCTGG CCGGCCTGGT CGCGCAGTAT
GCCGACCTGC CGGGCCAGGC CGCCTTTCTC GCCGACGTGG CCTGGCTGGT GCGCGCCTAC
GCCTGCCTGC TCGATGCCGA GCGCATCGGC CTGCGCCTGC GCGCGCTGGA CAAGGCCATG
TGCCCGCGCT TTCACGTCGA TCATGTGCCG CTGCGGCTGA TCACCAGCTA TGCCGGGGTC
GGCAGCGAGT GGCTGGAAGA GGGCGCGATG CCGCGCAACA GGCTCGGTCA GCCGGAGGCA
GAGCCTACGG ACGAGGCGTT GATCCAACGT TTGGACGCCG GCCATGTCGC CCTGGCCAAG
GGCGAGAAGT GGCAGGGTAA CGAAGGCCGC GGACTGATCC ACCGTTCACC GCAGCCGCCG
GCCGGCCAGC GGCGTTTGCT GCTGACCCTG GATTGGCTGG CCTGA
|
|---|
| Protein sequence | MFALQLPKLS RQVLGEDIQV LGEVLRDGVN LAIWQRRLPA QIADFADALL AQGEPLAHSM
TLELPRADSE PNLAGLVAQY ADLPGQAAFL ADVAWLVRAY ACLLDAERIG LRLRALDKAM
CPRFHVDHVP LRLITSYAGV GSEWLEEGAM PRNRLGQPEA EPTDEALIQR LDAGHVALAK
GEKWQGNEGR GLIHRSPQPP AGQRRLLLTL DWLA
|
|---|
| |