| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4532 |
|---|
| Symbol | |
|---|
| ID | 5106990 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 4968215 |
|---|
| End bp | 4969093 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640505803 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001190011 |
|---|
| Protein GI | 146309546 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTGC TTCCCTGGTC CCACTCCTGC TCTGCCGGCT TCACCCTGCG CGGCTGGCAC
AGCCCGCCCT CGGGCAAGCC GCTGCTGCAT TTTCTGCACG GCAATGGCTA CTGCGGGCGG
GTCTACACGC CGATGCTGGC GCTGCTGGCC GAGGACTTCG ACCTCTGGCT ATGCGACGTG
CAGGGCCATG GCGACAGCGA TCACGGTGGT CGTTTCCACG GCTGGAACCG CAGCGCCGAG
CTGGCGGTGG AGGCCTTCGA GGCGTTGCGC GCGCCGTTCG GCGAGGTGCC GCGCTTCGCC
CTCGGGCACA GCTTCGGCGG CGTACTGACC AGCCTGATCC TGGCTCGCCA CCCCGAGCTG
TTCCGGCGCG CCGTGCTGCT CGATCCGGTG CTGTTCAGCC CGGCGATGAT CGGCGTCATG
GCGTTGTCCG ACGTGGTCGG CCTGGCCCAG CGCAACACCC TGGCGAGCAA GGCGCGCAAG
CGCCGCCGGC AGTGGCCCGA TCGTGCAGCC GCCCACGCCG CGCTGCACGG CCGCGGCATG
TTCCGCGGCT GGGACGAGGC GGCCTTCGCC GCCTATATCG AACATGCCTT GAAGGACGTG
GAGGGCGGCG TCGAGCTCAA GTGCCGGCCG AGCCGCGAGG CCGAGATCTT CGGGTCCTAC
CCGCGTCGCC TGTGGCCGTC GCTGGCCAAG GTGAGCACCC CGACCGAAGT GATTCACGGC
GTGCATACCT ATCCCTTCGT CGCCAGGTCG GTGGCGCGCT GGTGTGCGAG CAATGCTCAT
GTGCGCAGCC AGGTGGTGCC CGGCGGGCAT TGCTTCATGC AGGAGCGGCC GGCCGACAGC
GCGGCGCGGG CGGCCGATTT TCTGCTGCAG CGGAGCTAG
|
|---|
| Protein sequence | MQLLPWSHSC SAGFTLRGWH SPPSGKPLLH FLHGNGYCGR VYTPMLALLA EDFDLWLCDV
QGHGDSDHGG RFHGWNRSAE LAVEAFEALR APFGEVPRFA LGHSFGGVLT SLILARHPEL
FRRAVLLDPV LFSPAMIGVM ALSDVVGLAQ RNTLASKARK RRRQWPDRAA AHAALHGRGM
FRGWDEAAFA AYIEHALKDV EGGVELKCRP SREAEIFGSY PRRLWPSLAK VSTPTEVIHG
VHTYPFVARS VARWCASNAH VRSQVVPGGH CFMQERPADS AARAADFLLQ RS
|
|---|
| |