| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4502 |
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| Symbol | |
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| ID | 5106960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4936144 |
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| End bp | 4937028 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505773 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001189981 |
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| Protein GI | 146309516 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCGC GTTTTTTGCA CAATTCGAGA CGCGTAGTTA TGAAGTCGTT CGCTTTTCGT
GGTCTTCCGC TTTTTCTGGT TCTACTTCTG GCCGGTTGCC AGAGCAGCCA GCAGCACAGT
CTCCCGCCGG TCGACGATCT GGTCGTTGCC TTCCGTCAGC TCGACCTGAG CCTGGCCGAA
GAACGCCTCG ACGATGCGCG CAGCCAGCTC AGCACGCTGC AGCAACGCGC CAGCCGCGAC
ACGCGCCTGG AGCAGTACCA GCGGCAGCTG GCTGAAGCCT ATATGGAGCA GGGCCGCGAA
GCGCTGCAGC AGGGCGATCT GGATCGCGCC GCGCAAGCAC TGGGCCAGGC ACGCAGCCTG
ATGCCGCAGG CGCCGGCCCT GAGTCACGAT CTCAACCAGG CCATCGACAG CGCCCGTACG
GCACGCCAGG TGGCTGCCGA GCAACAGGCA CGCGATGCAG CCGCCAAACT TGATGCCGAG
CGCCAGGAGC AACTGCGCCA GCAGCGCCAG GCCAGTGAGC GCCAGGCAGC GGCCAAGGCA
GCAGCCGCTC CGGTAGCCGC AAGCCAGCCA GCACCAGTGG TCGAGAGCAA GCCCACAGCG
CGCCTGATCG ATCCGAACGC CGCCACCAGC AGCGTGGCCA TGCCTATGCT GGACAACCAG
GACAACGAGA ACCTGCGCCG CCTGCTCGAC AGCGTGGCGG CGGATGTCGT GACCTTTCGC
TGCGCCGTGC GCATCGAAGT ACGCGAGGCC AAGGATTATC CCTGGGTTGC GGCGCTGCTC
TCGGCACGCA TCAAGAAGCT CGACCCGAGC TTTCGCCCGC AGTTGAGCCA GAAGATCGCT
CCGCAACAGG TGCCACGCCT GCTGTTGAGC CCAAAGCGCA GCTGA
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| Protein sequence | MIARFLHNSR RVVMKSFAFR GLPLFLVLLL AGCQSSQQHS LPPVDDLVVA FRQLDLSLAE
ERLDDARSQL STLQQRASRD TRLEQYQRQL AEAYMEQGRE ALQQGDLDRA AQALGQARSL
MPQAPALSHD LNQAIDSART ARQVAAEQQA RDAAAKLDAE RQEQLRQQRQ ASERQAAAKA
AAAPVAASQP APVVESKPTA RLIDPNAATS SVAMPMLDNQ DNENLRRLLD SVAADVVTFR
CAVRIEVREA KDYPWVAALL SARIKKLDPS FRPQLSQKIA PQQVPRLLLS PKRS
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