| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4494 |
|---|
| Symbol | |
|---|
| ID | 5106952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 4928694 |
|---|
| End bp | 4929944 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640505765 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001189973 |
|---|
| Protein GI | 146309508 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCCAA CCGCACCTCG CCCATCCAAC GCCACGCTGG TGCTGCTGGC CTCGCTTTAT
TGCGCGCAAG GCCTGCCGTC CGGGCTGATC GCCCACTCGT TGCCGGTGCT GCTGCGTCAG
CATGGCGTCG ATCTGGCATT GATCGGCCTG CTCAAACTGC TGGCGCTGCC CTGGCTGCTC
AAGGTGCTTT GGGCGCCCTG GGTCGACCGC CTGGCCTCGC CGCGACTGGG TCACCACCGT
GGCTGGATCC TGCCGCTGCA GAGCGGCGTG ATCGTCTGCG TGGTCATGCT GGCCATGCTG
GCGCCGCAGA CCCTGTTCGG CTCTGGCCTG TGGCTGCTGC TTGGCCTGCT GCTGCTGATC
AATCTGCTGG CTTCGACCCA GGACATCGCC ACCGATGGCC TTACCGTGCG CCTGCTGCCC
GAGCGCTGGC GCGGCCTCGG CAACAGTCTG CAGGTCGGCG GCTACAAGGT CGGCATGATC
GTCAGCGGCA GCGGCCTGTT GCTGGTGATC GACCCGCTGG GCTGGAACCT GGCGCTCGGC
CTGTTGGCCG GCCTGATCCT GCTGATGACC GTGCCGATCT GGCTATTTCC CGAACGCCGC
GTTCTGCCCT TCCAGCCCGC CCTGGCCGAA ACCGCCCTCG GCCCGCGCCT GCTGCTGAAC
CACTATCGCG GCCTGTTGGC GCAGCCCGGC ATGCTCCTGT GGCTGGCGGT GGTGCTGACC
TTCAAGCTGG GCGATTCGCT GGGCTCGCCG ATGATCAAGC CGATGCTGGT GGACCAGGGC
TGGAGCAGTG CAGCGCTCGG CCAACTGACT CTGATCAGCA GCCTGGCCGG CATCGCTGGC
GCGGTGCTCG GCGGCCTGCT CTACGCCCGC ATCGGCGTAC TGCGCGCACT GATCCTGTTC
GGCGCCCTGC AGGCCATCGG CATCGCCGCC CTGGCGCTGC TGGTGGGGCA GGGCAATGTC
GGGCTGGTCT ATGCCGTCAC TCTGTTCGAG CAGGTGGCCG ACGGCATGTC CACCGTCGCC
CTGTTCGCCG CGATGATGCG CATGTGCCGC CCCGAACACG AAGGCGCCGA CTTCACCCTG
CAGGCGTCGG CACAGGTGCT GCTGTCCGGC TTCGTCGGGG CCAGCAGCGG GGTGCTGGCC
AAGGTGTTGG GCTATGAGGG GTTGTTCGTC GGGGCGGGGG TGTTGGGGAT GCTGGTGTTG
GGCCTCGTGC TGATGCACAC GCGCGTGGTG GCTCAGTTTG CCCAGAACTA G
|
|---|
| Protein sequence | MSPTAPRPSN ATLVLLASLY CAQGLPSGLI AHSLPVLLRQ HGVDLALIGL LKLLALPWLL
KVLWAPWVDR LASPRLGHHR GWILPLQSGV IVCVVMLAML APQTLFGSGL WLLLGLLLLI
NLLASTQDIA TDGLTVRLLP ERWRGLGNSL QVGGYKVGMI VSGSGLLLVI DPLGWNLALG
LLAGLILLMT VPIWLFPERR VLPFQPALAE TALGPRLLLN HYRGLLAQPG MLLWLAVVLT
FKLGDSLGSP MIKPMLVDQG WSSAALGQLT LISSLAGIAG AVLGGLLYAR IGVLRALILF
GALQAIGIAA LALLVGQGNV GLVYAVTLFE QVADGMSTVA LFAAMMRMCR PEHEGADFTL
QASAQVLLSG FVGASSGVLA KVLGYEGLFV GAGVLGMLVL GLVLMHTRVV AQFAQN
|
|---|
| |