| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4473 |
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| Symbol | |
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| ID | 5107168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4902853 |
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| End bp | 4904352 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640505744 |
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| Product | xylulokinase |
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| Protein accession | YP_001189952 |
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| Protein GI | 146309487 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | [TIGR01312] D-xylulose kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.495653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCTCG GTATCGATTG CGGCACCCAG GGCACCAAGG CGCTGGTGCT GGATGCTGAC
GGTGGCCAGG TGCGCGGCGC CGGCAGCGCC AGCCATACCC TGCTGAGCGC AGCCAACGGC
CGCCGCGAAC AGCAGCCGCA GCAGTGGCTG GAGGCCTTCG AGCAGGCGAC CGCCCAGGCG
CTGGCGGCTG CCGGCATCAG CGGCGAGCGG ATTCTCGGCA TCGGTGTGTC CGGCCAGCAG
CATGGCCTGG TGCTGCTCGA TGAACAGGGC GCGGTGCTGC GCCCGGCCAA GCTCTGGTGC
GATACCGAGT CGAGCGCCGA GAACCAGCGC CTGCTGGACC ACCTCGGCGG CGAAAGCGGT
TCGCTGCAGC GCCTGGGCGT GGCCATCGCG CCGGGCTATA CGGTGTCCAA GCTGCTCTGG
ACCCGAGAGC AGCACCCCGA TGTCTTCGCC CGCATCGCGC ATATCCTGCT GCCTCACGAC
TACCTCAACC ACTGGCTCAC CGGCCGCGCC TGCAGCGAGT ACGGCGATGC CTCCGGCACC
GGCTATTTCA ACGTGCGCAC GCGCAACTGG GATGTCGAGC TGCTGAACTT CATCGACCCC
AGCGGGCGCC TTTGCAACGC GCTGCCGGAG CTGATCGAGT CGGATCAGCC AGTGGGCCGC
CTTCGCCCGC AGATTGCCGA GCGACTGGGC CTGAACCCGG ATGCCGTGGT GGCCAGCGGC
GGTGGCGACA ACATGATGGG CGCCATCGGC ACCGGCAATA TCCGCCCCGG CGCGATCACC
ATGAGCCTGG GCACCTCCGG CACGCTCTAC GCCTACAGCG ACCAGCCGAC GGTGAGCCCG
CACGCGCAGG TGGCCACTTT CTGCTCGTCA TCCGGCGGCT GGCTGCCGCT GATCTGCACC
ATGAACCTGA CCAACGCCAG CGGGCTGATC CAGCAGTTGC TGGCATTGGA TATCCACAGC
TTCGACGCCC TGGTGGCGCA GGCGCCCATT GGCGCCGAGG GCCTGCTGTT GCTGCCGTTT
TTCAACGGCG AACGGGTACC GGCCCTGCCG AACGCACGCG CCAGTCTGCT GGGCATGGAC
AGCGACAACC TGACCCGCGC CAACCTGTGC CGGGCGGTGG TCGAGGGCAC CGCCTTCGGC
CTGCGCTACG GCCTCGACCT GCTGCGCGCC AGCGGCCTGC GCAGCGACGA CCTGCGCCTG
ATCGGCGGCG CGGCGAAGAG CCCGGTATGG CGCCAGGTGA TTGCCGACAT CATGGGCATG
CCGCTGGTCT GCCCGCAGCA CACCGAAGCC GCCGCGCTGG GCGCCGCCAT CCAGGCCGCC
TGGTGCCTGA CGCGCGCTGC GGATCGCCAG GCGCAGCTGG CCGAACTGTG CGAGCGTTGC
GTGCAGCTCG ATACCAACAC CCAGACGCAA CCGGACCCGG CGCGCACAGC GCAGTATGAC
GCGGTCTATC AACGCTACCG CGAGCAGGTC GGCCGGCTCG CCGCAAACAC ACCGGCGTGA
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| Protein sequence | MYLGIDCGTQ GTKALVLDAD GGQVRGAGSA SHTLLSAANG RREQQPQQWL EAFEQATAQA
LAAAGISGER ILGIGVSGQQ HGLVLLDEQG AVLRPAKLWC DTESSAENQR LLDHLGGESG
SLQRLGVAIA PGYTVSKLLW TREQHPDVFA RIAHILLPHD YLNHWLTGRA CSEYGDASGT
GYFNVRTRNW DVELLNFIDP SGRLCNALPE LIESDQPVGR LRPQIAERLG LNPDAVVASG
GGDNMMGAIG TGNIRPGAIT MSLGTSGTLY AYSDQPTVSP HAQVATFCSS SGGWLPLICT
MNLTNASGLI QQLLALDIHS FDALVAQAPI GAEGLLLLPF FNGERVPALP NARASLLGMD
SDNLTRANLC RAVVEGTAFG LRYGLDLLRA SGLRSDDLRL IGGAAKSPVW RQVIADIMGM
PLVCPQHTEA AALGAAIQAA WCLTRAADRQ AQLAELCERC VQLDTNTQTQ PDPARTAQYD
AVYQRYREQV GRLAANTPA
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