| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4441 |
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| Symbol | |
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| ID | 5107136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4867376 |
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| End bp | 4868155 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505712 |
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| Product | amino acid ABC transporter periplasmic protein |
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| Protein accession | YP_001189920 |
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| Protein GI | 146309455 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGAA GGCAATCGAG CGCCGAAGAT GGGAGAAACA GGGTGAGGCA TTGGACGGCA
CTGCTGCTGA GCCTGCTGTG CTGCGCGACG GCGCAGGGCG AGGCCCTGCG GCTGGTGACG
GGGGACGACT ATGCGCCATT CACCGGTAAG GCGCTGCCCG GGCAGGGCAT GCTCACGCAG
GTGGTGCGCG CGGCGCTTGC CGAGCAGGGC CTGGGCAGCA CGCTGGAATG GCTGCCGTGG
AATCGCGGCT ACCTCAAGAC CAGACGCGGC GAATACGACG GCACCTTCCC CTACGTGCGT
TCGCCACAGC GCGAGGCGGA CTTTCTCTAC TCGGCGCCGC TGTACGTCAC CGAGCAGCAT
TTGTTCAGCC GTACCGAGGA CCGCATCGAA ATCGGCGATC TGCCGGGTCT GGCGGGACGC
CGCCTGTGCT ACCCGCTCGG TTGGCAGCCG CCCCAGGCGA TCCAGGAACT GATCGAGGCA
GGGGTGCTTC AGCGCCATTC GCCGCTCGGG CTCAAGGAGT GCGCGCAACT CTTGTTGCTG
CAGCGGGACG ATCTGTTTCT CGCCGATCGT GGCCTGGGCG AGAGTGCTCT GCGCGCGATC
GGTGCCGAGG CCGGCCAGTT TCACCGCTCG ACGACGATGC TGGGCAACAA CACCCTGCAT
TTCATCGTCT CCAGGCGGCA TCCGCGCGCC GCGGAGCTAA TCGCCCGCTT CGACCGCGGC
CTTGCCGCGC TCAAGGCGCG TGGCGAGTAT CAGCGGTTGA TCGAGAGCAA CCTGGAGTAG
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| Protein sequence | MTRRQSSAED GRNRVRHWTA LLLSLLCCAT AQGEALRLVT GDDYAPFTGK ALPGQGMLTQ
VVRAALAEQG LGSTLEWLPW NRGYLKTRRG EYDGTFPYVR SPQREADFLY SAPLYVTEQH
LFSRTEDRIE IGDLPGLAGR RLCYPLGWQP PQAIQELIEA GVLQRHSPLG LKECAQLLLL
QRDDLFLADR GLGESALRAI GAEAGQFHRS TTMLGNNTLH FIVSRRHPRA AELIARFDRG
LAALKARGEY QRLIESNLE
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