| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4420 |
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| Symbol | |
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| ID | 5107115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4842103 |
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| End bp | 4843068 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640505686 |
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| Product | surface presentation of antigens (SPOA) protein |
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| Protein accession | YP_001189899 |
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| Protein GI | 146309434 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.401557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCGA CGCCATGGCC AAGGCGATGC TGCTACGGCC TGCCGGCACA TCAAAACATC
CTCTGCACGC CCAGCGAAGT ACTCCCTGGT GCACGCGCAG TTACAACCAG GAATACAGCC
CACAACATGA CCGGGATTAA AAAAGTCCTT CATGGCGTGC CCGCCGACAG TCTGACCCGG
TTGAAACCGC AGAAACTTGG CCGGCACTAT CACAAGATTC CCCACTATAT TCGCGAGCTT
TCCAGCAAGT ATCCGCGAAT CATCAGTGAC TACTTTCTGC GCAACTATCG AATCAATCTC
GAACTGCTTC GAGTCGATGT TCACGAGCAG GTAGATAAAG AAGCCGAATG CCTTTATCGC
TCGACCCTGG GCAAGGTCGG TTTCGCCATC GACCGCGCCC TGCTGACCGA GGCGCTGGAG
TGCTACTACG GCGGCACCTG CCTGCCCAAC CACGAAGCGC CGCCGGTCAG CACCTCGGAA
CAGCGCATGC GTACGCGCCT GGGCCTGGAC GTCAGCCAGC TGTTCGCCCG CTCGATTCTC
GCCGGGCAGA CCTTCGGCAA GCTCGAGCCT TACGACAACG CCTACGAAGA GGCGACCTGG
GAGTACGTGG CGGAGTTCCA CTTCACCAGC CACATCACCG GCAGCCAGGC ATCGATCTTC
ATCTATCTGG ACACGCAACT GGTCGATGAG CTGACCAACC GCCTGACGCC CCCGGCACCG
GTGGCCCAAA GCGGCAATTC GCTCAATCAG ATACGCCAGT TGCCGGTGCG CCTGGACTGC
ATGGTGGCCA GCCTGCAGAT GCCGCTGGCC CAGGTACTGG CCCTGCGTCC CGGCGACATC
CTGCCGATGC GCCTGCTGGA GCGCTGCGAC GTGCAGATCA ACCAGCAGAA GCTGTTTCGC
GGCGCCATCT TCGAAGACGA CGGCTCCTTG TTCCTGACTT CTCTTGAGAG CGTGAAGACC
CCATGA
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| Protein sequence | MHSTPWPRRC CYGLPAHQNI LCTPSEVLPG ARAVTTRNTA HNMTGIKKVL HGVPADSLTR
LKPQKLGRHY HKIPHYIREL SSKYPRIISD YFLRNYRINL ELLRVDVHEQ VDKEAECLYR
STLGKVGFAI DRALLTEALE CYYGGTCLPN HEAPPVSTSE QRMRTRLGLD VSQLFARSIL
AGQTFGKLEP YDNAYEEATW EYVAEFHFTS HITGSQASIF IYLDTQLVDE LTNRLTPPAP
VAQSGNSLNQ IRQLPVRLDC MVASLQMPLA QVLALRPGDI LPMRLLERCD VQINQQKLFR
GAIFEDDGSL FLTSLESVKT P
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