Gene Pmen_4416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4416 
Symbol 
ID5107111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4837258 
End bp4838322 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content65% 
IMG OID640505682 
Productflagellar motor switch protein FliG 
Protein accessionYP_001189895 
Protein GI146309430 
COG category[N] Cell motility 
COG ID[COG1536] Flagellar motor switch protein 
TIGRFAM ID[TIGR00207] flagellar motor switch protein FliG 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.202988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA CCTCAACCCA GCCTGACGGC CGCGGTGGTT CCACCGCCAA GGAAATGCGC 
ATGCGCGTGC AGAATCGCTC GCTGAGTTCG TCCGAGCAGG CGGCCATCCT CATGCTGAGC
ATGGGCGACG AGATTTCCGC CGGCGTGCTC CGCCACTTCT CCCGCGAGGA AATCGTCGCC
ATCAGCCAGG CCATGGCGCG CCTGTCCAAC GTCAAGCAGC CGATGGTCTC CGACGTGATC
GGCCGCTTCT TCGAGGACTA CAAGGAGCAG AGCAGCATCA AGGGCGCCTC GCGCGGCTAC
CTGGCCGGCA TGCTCAGCAA GGCACTGGGC AGCGAGATCA CCCGTTCGCT GCTCGACAGC
ATCTACGGCG AGGAAATCCG CGCCAAGATG GCCAAGATGG AATGGCTCGA CCCCAAGCAG
TTCGCCGCGC TGATCGCCAA GGAGCACGCA CAGATGCAGG CGGTGTTTCT CGCCTTCCTG
CCGCCGGGCA TGGCCAGCGA GGTGCTCGAG TGCATGCCCA AGGAGCGGCA GGACGAGCTG
CTCTACCGCA TCGCCAACCT CAGCGAGGTC AACAGCGACG TGATCGCCGA GCTGGAGCAG
CTGATCGAAC GCAGCCTGGC GGTGCTCAGC ACCCAGGGCT CGCAGGTGCG CGGCATCAAG
CAGGCGGCGG ACATCATGAA CCGCTTCAAG GGCGACCGCG GGCAGATGTT CGAACTGCTG
CGCGCTCACG ACGACCAGCT GGTGGAGCGC ATTGAGGACG AGATGTACGA CTTCTTCATC
CTCTCGCGGC AGAACCAGGA CGTGCTGCAG GCACTGCTCG AGGCGGTGCC GCTGGAGGAA
TGGGTGGTCG CGCTCAAGGG CGCCGAGCCC GAGCTGGTGC GCGCCATCAC CGGCGCCATG
CCCAAGCGCC AGGCGCAGCA GATGGAATCG ATCAACCGTC GTCAGGGCCC GGTGCCATTG
AGCCGCGTCG AGCAGGTGCG CAAGGACATC ATGGCCGTGG TGCGGGAAAT GTCGGCCAGC
GGCGAGCTGC AGGTGCAGCT GTTCCGCGAA CAGACGGTGG AATGA
 
Protein sequence
MSETSTQPDG RGGSTAKEMR MRVQNRSLSS SEQAAILMLS MGDEISAGVL RHFSREEIVA 
ISQAMARLSN VKQPMVSDVI GRFFEDYKEQ SSIKGASRGY LAGMLSKALG SEITRSLLDS
IYGEEIRAKM AKMEWLDPKQ FAALIAKEHA QMQAVFLAFL PPGMASEVLE CMPKERQDEL
LYRIANLSEV NSDVIAELEQ LIERSLAVLS TQGSQVRGIK QAADIMNRFK GDRGQMFELL
RAHDDQLVER IEDEMYDFFI LSRQNQDVLQ ALLEAVPLEE WVVALKGAEP ELVRAITGAM
PKRQAQQMES INRRQGPVPL SRVEQVRKDI MAVVREMSAS GELQVQLFRE QTVE