| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4406 |
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| Symbol | |
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| ID | 5107259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4828858 |
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| End bp | 4830198 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505672 |
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| Product | hypothetical protein |
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| Protein accession | YP_001189885 |
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| Protein GI | 146309420 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.13627 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCCCT CCACGAGTCT TCCCGCTTCC GTCTACTTCG CCGACTTCGG TCTCGTTCTG
TTCGCCCTGT TCCTGGTCCT GCTCAACGGC TTCTTCGTCG CCGCCGAGTT CGCCATCGTG
CGCCTGCGCG CCACCAAGGT CGACGCCCTG GCCGAGGCGC ACGGCTGGCG CGGGCACATC
CTGCGCACCG TGCACAACCA GATGGACGCC TACCTGTCGG CCTGCCAGCT GGGCATCACC
CTGGCCTCGC TGGGCCTGGG CTGGGTCGGC GAGCCGGCCT TCGCCGAACT GCTCACCCCG
CTGCTGGCGG CCATCGGCAT CGAGTCGCCG AGGCTGATTC ACGGCATCGC CTTCTTCACC
GCGTTCTCGA TCATTTCCTA CCTGCATATC GTCGTCGGCG AGCTGGCGCC CAAGTCCTGG
GCGATCCGCA AGCCCGAGCT GCTCTCGCTG TGGACGGCTG CGCCGCTGTA CGCCTTCTAC
TGGCTGATGT ACCCGGCGAT CTTCCTGCTC AACGCCAGCG CCAACGCCAT CCTCCGTATC
GCCGGGCAGG GCGAGCCGGG CCCGCATCAC GAGCACCACT ACAGTCGCGA GGAGCTCAAG
CTGATCCTGC ATTCCAGCCG CGCCGGCGCG CCCACCGACC AGGACCTGCG CGTGCTGGCC
TCGGCGGTGG AGCTGGGCGA GCTGGAGGTG GTGGACTGGG CCAACTCGCG CGAAGACCTG
GTCTTCCTGG AGCTCAACGC CAGCCTCGAT CAGGTGTTCG CCACCTTCCG CCGGCACAAG
TACAGCCGCT ACCCGATCTT CGACGAGAGC AAGGGCGAGT TCGTCGGCGT GCTGCATATC
AAGGACCTGC TGCTGCAGCT GTCGCTGCTG GAGATGCTGC CGTCCGCGCT CAACCTGGCG
GATCTGATGC ATCCGCTGGA GCGGGTCAAC CGGCACATGC CGCTGTCGCA GCTGCTCGAG
CAGTTCCGTC AGGGCGGCGC GCATTTCGCC CTGGTCGAGG AGGCCGACGG CAAGGTGATC
GGCTACCTGA CCATGGAGGA CGTGCTCGAA GCCCTGGTCG GCGATATTCA GGACGAGCAC
CGCAAGGCCG AGCGCGGCAT CCTCGCCTAC CAGCCGGGCA AGCTGCTGGT GCGCGGCGAC
ACGCCGCTGG CCAAGGTCGA GCGCCTGCTT GGCGTCGACC TCGACCATAT CGAGGCCGAG
ACCCTCGCCG GGCTGATCTA CGAGACGCTC AAGCGCATGC CCGAGGAGGA AGAGGTGCTG
GAAACCGAGG GCCTGCGCAT CATCGTCAAG AAGATGAAGG GGCCCAAGGT GGTGCTGGCC
AAGGTGCTCA AGATCGCCTG A
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| Protein sequence | MDPSTSLPAS VYFADFGLVL FALFLVLLNG FFVAAEFAIV RLRATKVDAL AEAHGWRGHI
LRTVHNQMDA YLSACQLGIT LASLGLGWVG EPAFAELLTP LLAAIGIESP RLIHGIAFFT
AFSIISYLHI VVGELAPKSW AIRKPELLSL WTAAPLYAFY WLMYPAIFLL NASANAILRI
AGQGEPGPHH EHHYSREELK LILHSSRAGA PTDQDLRVLA SAVELGELEV VDWANSREDL
VFLELNASLD QVFATFRRHK YSRYPIFDES KGEFVGVLHI KDLLLQLSLL EMLPSALNLA
DLMHPLERVN RHMPLSQLLE QFRQGGAHFA LVEEADGKVI GYLTMEDVLE ALVGDIQDEH
RKAERGILAY QPGKLLVRGD TPLAKVERLL GVDLDHIEAE TLAGLIYETL KRMPEEEEVL
ETEGLRIIVK KMKGPKVVLA KVLKIA
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