| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4395 |
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| Symbol | |
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| ID | 5107248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4817570 |
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| End bp | 4818427 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640505661 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001189874 |
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| Protein GI | 146309409 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.181734 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAAT GCAACAGCCT GCTGATCGCC GGGTGTGGCG ATGTCGGTAC CCGCCTTGGC
CTGCGCATGG CCGAGCAGGG CTGGCGCGTG CTGGGCCTGC GCCGCAATGT GGCCGCGCTG
CCGGCCGCGA TCGAGCCGCT GGCCGGCGAT CTGCAGGCCG ACGCCTGTCC CGCCGATTGG
CCGCAGGGTC AGCTGGACTA TCTGGTGTAC TGCGCGGCTG CCACCCAGCA CGATGAAGCC
GGCTACCGCG CGGCCTATGT CGACGGCCTG CGCCGCGTGC TGGGCTGGCT GGGGCAGCAT
GGTCAGCGAC CGCGGCGCAT CCTGTTCGCC TCCAGCAGCG GCGTTTACGG GCAGCAGGAG
GGCGAGTGGA TCGACGAGGA CTCTGCCGCC GAAGCGCAAA GCTTTTCCGC CGTGATCATG
CGCGAGGCCG AGCGTGTGGC GTTCGCCAGC GGCCTGCCGG CCACCACGGT GCGCCTGACC
GGGCTCTACG GACCGGGGCG CGAATGGCTG CTGAGCCAGG TGCGCGGTGG CTATCGGGTC
AGCGAGACGC CACCGCTGTA CGGCAACCGC ATTCATGTCG ATGACGCAGC CGGGCTGCTC
GCCACGCTGT TGCAGGCGGA CGCCGCCGGC GTGCCCCTGG CTGCTTGCTA CCTTGGCGTC
GATGACGAGC CGGCGCCGCT GCACGAGGTG GTGGCCTGGT TGCGCGAACG CCTGGGCGTC
AGCCACTGGA GTGATGAGCA GCGCGTGCGC CGCGCCGGCA GCAAACGTTG CAGCAATGCC
CGCGCTCGCG CTTTGGGGTG GGCGCCGCAA TATCCCAGCT ATCGCGAGGG TTATGCGGCG
ATCCTCGCCG GGGGCTGA
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| Protein sequence | MSECNSLLIA GCGDVGTRLG LRMAEQGWRV LGLRRNVAAL PAAIEPLAGD LQADACPADW
PQGQLDYLVY CAAATQHDEA GYRAAYVDGL RRVLGWLGQH GQRPRRILFA SSSGVYGQQE
GEWIDEDSAA EAQSFSAVIM REAERVAFAS GLPATTVRLT GLYGPGREWL LSQVRGGYRV
SETPPLYGNR IHVDDAAGLL ATLLQADAAG VPLAACYLGV DDEPAPLHEV VAWLRERLGV
SHWSDEQRVR RAGSKRCSNA RARALGWAPQ YPSYREGYAA ILAGG
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