Gene Pmen_4382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4382 
Symbol 
ID5107235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4807122 
End bp4807724 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content67% 
IMG OID640505648 
Producthypothetical protein 
Protein accessionYP_001189861 
Protein GI146309396 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0993659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCAC CGCTCCTGAC CCGTTGTACG CTGCTGCTTG GTCTGCTGCT GCCGTTGTCC 
GGGTCGGCTG CGGAGCTGTA TCGCTACGTC GACGACAAGG GCGTGACGGT GCTCAGCCGC
CAGGGTGTGC CGCCCGAGTT CATCGGCAAG GGTTATGAGG TGCTCAACGA TCAGGGCCGT
GTGCTGCGGG TCATCCCGCC GGCCCCGACG CCCGAAGAGT TCGCCCGCAT GCAGGCGGAC
AAGGCGCGCG CCAGCAACGA TGCGCAGCTG CTGCGTCTGT ATACCAATCT CGACGATGTC
GACCGTGCGC GCGAGCGCAA GCTGGCTGAG CTCGATGGCG TCACCAGCGT CGCCCGCGGC
AACCTGCAGT CGGTGCGTAC CCAGCAGGCC AACCTGCAGA GCCAGGCCGC CGAGCATGAG
CGGGCCGGGC GCCAGGTGCC CGAACACCTG CTGGCGCAGA TCAACAACCT CAAGGAAGAA
CAGCAGCGGC TGATGCGCGA CATTGCCCGC TATCGCGAGG CCCGCACCCA GGCCGAGGCC
GACTTCGCCG CCGACCGTGC ACGTCTGGCC GAGCTGTTTG GCGAACCCCA GGCCAAGCCG
TAA
 
Protein sequence
MPAPLLTRCT LLLGLLLPLS GSAAELYRYV DDKGVTVLSR QGVPPEFIGK GYEVLNDQGR 
VLRVIPPAPT PEEFARMQAD KARASNDAQL LRLYTNLDDV DRARERKLAE LDGVTSVARG
NLQSVRTQQA NLQSQAAEHE RAGRQVPEHL LAQINNLKEE QQRLMRDIAR YREARTQAEA
DFAADRARLA ELFGEPQAKP