| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4372 |
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| Symbol | |
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| ID | 5107225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4796540 |
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| End bp | 4797754 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640505638 |
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| Product | putative signal transduction protein |
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| Protein accession | YP_001189851 |
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| Protein GI | 146309386 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG1639] Predicted signal transduction protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.543367 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTG CAGTTCATTC CGTGGAAGTT CTGATCGCCG AGGCCGATCC CTGGACCTCC
AACCTGCTCC AGCAACTGGT GCTGGACGTG CGCGGCGACG CCCGCGTGCT GCAGGTCAGC
GATGGGCAGG CGGCCCTGGC CCGTTGCAAG CGGCGGCTAC CGGATCTGGT GATCGCCGAC
GGCGAGCTGC CCGGGCTCGA TGGCGTGGAA CTGCTGCGCC AACTGCGTCG CCATCCGCGT
ACCCCGGCGC TGCCCTTCGT GCTGATCAGT GGCCGCCTCG ACGCGCAGAG CGTGCGCGCC
GCGCGGCCGC TGGCGCCGAG CGCCTATCTG GCCAAGCCGT TCAACGCCGA AAGCCTGCGT
CAGCGCCTGC ATGCGCTGCT GCCCGCTGCC AGCGGGACGG TCTCGCTGCG GCCGGCGCTG
CTGGTCAGCG AGCTGCGCGA GTTCCTCGAC ACGGTGCGCG AGGAGGGGCA GGGCGCGCCT
CTGCTCAGCG ATGTGCGCAA CGCCGTGAGC CAGGGGCTGC AGTCCGGCGA GCAGGACCTG
GGCGAACTGG AGGCGGTGTT CGGTCGTGAT CCGCAGATCA CCGCACTGCT GATCGCGGCG
GCCAGCACGG CGGCACAGCA CCAGGGCGTG CCCTGCCAGA CCCTGGCGCA GGCCCTGCAG
CGTCTGGGGG TGGCGCGCAC GCTGAATCTG GTGCTGGGCC TGGCCCTGCA GCGCAATGCC
CAGCTGCGCG ACCCGCGTCT GGCCGACCTG GCGACGCGTG CCTGGCAGCA GGCGCGTCGC
AGTGCCGAGC TGGCGCGCTG GCTGGCCGGG GAACTGAAGC TGGATGCCGA GCTGTGCTTC
ACCGCCGGCC TGTTGCACAA CCTGGGCGAG CTGGCCTTGC TGCGCAGCCT GCAGGACTGG
CTGGAGGCTG GCGGCGAGCT GAGCGACGAG CAGATCGATG ATGCCATGCG CCAGCGTGCG
GCCAGTTTCG GTTCGGCCCT GCGCATCCGC TGGCGTCTGC CCTTCGGCCT GCGCGAGTTG
ATCGCGGCGT TCTACGGGCT GGGCAGTGGG GTATTTTCCC GCGAGGCGCT GGTGCTCAAT
CTCAGCGGCC TGCTGCTGGC GCTGCCGGTC AGCGAGCAGC CGACGAGCCT GGCCGAGGCG
CGCTGCGTAC GCATGTTGCG GCTCGACCTG GGCCTGCTCG AGCGCCTGCC GACCGAGCTT
TACCAGGCTT CCTGA
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| Protein sequence | MTAAVHSVEV LIAEADPWTS NLLQQLVLDV RGDARVLQVS DGQAALARCK RRLPDLVIAD
GELPGLDGVE LLRQLRRHPR TPALPFVLIS GRLDAQSVRA ARPLAPSAYL AKPFNAESLR
QRLHALLPAA SGTVSLRPAL LVSELREFLD TVREEGQGAP LLSDVRNAVS QGLQSGEQDL
GELEAVFGRD PQITALLIAA ASTAAQHQGV PCQTLAQALQ RLGVARTLNL VLGLALQRNA
QLRDPRLADL ATRAWQQARR SAELARWLAG ELKLDAELCF TAGLLHNLGE LALLRSLQDW
LEAGGELSDE QIDDAMRQRA ASFGSALRIR WRLPFGLREL IAAFYGLGSG VFSREALVLN
LSGLLLALPV SEQPTSLAEA RCVRMLRLDL GLLERLPTEL YQAS
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