| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4296 |
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| Symbol | |
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| ID | 5107070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4704050 |
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| End bp | 4704679 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640505562 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001189775 |
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| Protein GI | 146309310 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCT TGCGGCGCGT CTGGGAGCAC TTCGAGGAAG GCTTCATCGC TTTCCTCCTG
GCGGCCATGA CGCTGATCAC TTTCGTCTAC GTGATCCTCA ACAACTTCTA CACCCTGTTC
TACTGGCTGG GTGACACCTT CGGCGGTAAC GAGACTCTGC TCGCTATCGG CGACTTCATT
CTCGACATGG CCCAGGCGAT GACCTGGAGC AATGCCCTGA CCAAGGCCCT GTTCGGCTGG
CTGATCTTCT TCGGCCTGGC CTATGGCGTG CGCACCGCCG GCCACATCGG CGTCGATGCC
CTGGTCAAGC TGGCCCCGCG CGGTATCCAG CGCATCATCG GCGTGATCGC CTGCTCGGCC
TGCCTGGGCT ACGCCGGCCT GATCGCGGTC GGCAGCTTCG ACTGGGTCCG CACCCTGTTC
ATCGCCGGCA TCGGTGCCGA AGACCTCGGC CACTACGGCA TCCAGCAGTG GCACATCGGC
ATGATCGTGC CCTTCGGCTA CGCCATGGTG TTCGTCCGCT TCCTCGAGAT CCTGGTGCGC
ATCCTGCGCA ATCAGCAGAC CGGCCTGGGT CTGGCCGACG AGGCCGCCGA CGCCCTGAAG
GTCAATGAGC ACGAGGAGCC CAAGCAATGA
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| Protein sequence | MNALRRVWEH FEEGFIAFLL AAMTLITFVY VILNNFYTLF YWLGDTFGGN ETLLAIGDFI
LDMAQAMTWS NALTKALFGW LIFFGLAYGV RTAGHIGVDA LVKLAPRGIQ RIIGVIACSA
CLGYAGLIAV GSFDWVRTLF IAGIGAEDLG HYGIQQWHIG MIVPFGYAMV FVRFLEILVR
ILRNQQTGLG LADEAADALK VNEHEEPKQ
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