| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4271 |
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| Symbol | |
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| ID | 5107045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4674726 |
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| End bp | 4675421 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505536 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001189750 |
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| Protein GI | 146309285 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4215] ABC-type arginine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000000000112521 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCTTCG AACTCCACGG ATTCGGCCCC GCCCTGGCGG CCGGCACCCT GATGACCATC
AAACTGGCGC TGTCCGCGCT GGCGGTGGGT CTGGTGCTCG GTCTGCTCGG CGCACTGGCC
AAGACTTCGC CGTACAAGCC GCTGCAGTGG CTCGGCGGCA GCTATTCCAC CATCGTGCGC
GGCGTGCCCG AACTGCTCTG GGTGCTGCTG ATCTATTTCG GCACGGTCGG CCTGATGCGC
AGCCTGGCCG ACCTGCTCGG CGTCGCCAGC CTTGAGCTCT CCGCCTTCGC CGCAGGCACC
ATCGCCCTCG GCCTGTGCTT CGGCGCCTAC GCCACCGAGG TGTTTCGCGG CGCCATCCTG
GCCATCCCCA AAGGCCATCG CGAAGCCGGC ATGGCCCTGG GCATGTCCAA GGGGCGCATC
CTCTGGAAGC TGATCCTGCC GCAGATGTGG CGCATCGCCC TGCCCGGCCT GGGCAACCTG
TTCATGATCC TGATGAAGGA CACCGCGCTG GTCTCGGTGA TCGGCCTCGA GGAGATCATG
CGTCGCTCGC AGATCGCGGT GACCGCGAGC AAGGAGCCCT TTACCTTCTA TATGGTTGCA
GCCTTCATCT ATCTGGGCCT GACCATCCTC GCCATGATCG GCCTGCATTT TCTCGAGAAG
CGCGCCAGCC GCGGCTTCGT CCGGAGCGCG TCATGA
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| Protein sequence | MIFELHGFGP ALAAGTLMTI KLALSALAVG LVLGLLGALA KTSPYKPLQW LGGSYSTIVR
GVPELLWVLL IYFGTVGLMR SLADLLGVAS LELSAFAAGT IALGLCFGAY ATEVFRGAIL
AIPKGHREAG MALGMSKGRI LWKLILPQMW RIALPGLGNL FMILMKDTAL VSVIGLEEIM
RRSQIAVTAS KEPFTFYMVA AFIYLGLTIL AMIGLHFLEK RASRGFVRSA S
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