| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4251 |
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| Symbol | |
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| ID | 5106675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4655705 |
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| End bp | 4656439 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640505515 |
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| Product | amino acid ABC transporter periplasmic protein |
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| Protein accession | YP_001189730 |
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| Protein GI | 146309265 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.000526957 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCCTCA TTCGATTCTT GACCGTCCTG GCCCTGTCGT GTGGCCTCAG CCTGGCGCGC
GCCGAGCCGC TGGTGCTGCT CACGGAGAAT CTGCCCCCCT TCAACATGTC GATATCCGGC
ACCAACTACG CCCGCGACGA TGGTGTGACC GGCATCAGCT CCGACATCTT GCGTGCGGTG
TGCGAGCGCG CCGAGATGGA GTGTCAGCAG ATCCTGCGTT TCCCCTGGCA GCGCGTGTAT
CAGCAGACGC TGGACGATGT CGGTTACGGC CTGTTCTCCA CCGCACGCAC GGCGGAGCGC
GAGAGCCTGT TCAAATGGGT CGGGCCCATC GCCAGGAACG AGTGGGTACT GTTCGCCAAG
GGCGACAGTC CGATCCAGCT GGCCAGCATC GAGGACGCGC GCCGTTACCG GATCGGTGGC
TACAAGGGCG ACGCCAAGAC CCAGTTCCTC CTGGACAGAG GCCTGGAGGT GCAGACCGCG
CTGCGTGACA CCGAGAACGT CCGCAAGCTG GAGCGTGGGC AGATCGACCT GTGGGTAACC
TCCAATCAGG CTGGTCGTTT CGTGGCACGT CAGGAAGGCA TGGAGAACCT CAGGGTCGTG
CAGCACCTGC ATACGGCCGA ACTCTATCTG GCCCTCAACC TGCAAACGCC CGATGAGGTG
GTGCAGAAGT TGCAGGCTGC GCTGGATGCA TTGCGTGCCG AGGGTGCGCT GAAGAACATC
GAAGCGCGTT ACTGA
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| Protein sequence | MFLIRFLTVL ALSCGLSLAR AEPLVLLTEN LPPFNMSISG TNYARDDGVT GISSDILRAV
CERAEMECQQ ILRFPWQRVY QQTLDDVGYG LFSTARTAER ESLFKWVGPI ARNEWVLFAK
GDSPIQLASI EDARRYRIGG YKGDAKTQFL LDRGLEVQTA LRDTENVRKL ERGQIDLWVT
SNQAGRFVAR QEGMENLRVV QHLHTAELYL ALNLQTPDEV VQKLQAALDA LRAEGALKNI
EARY
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