| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4239 |
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| Symbol | |
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| ID | 5106663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4643364 |
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| End bp | 4644392 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640505503 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001189718 |
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| Protein GI | 146309253 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.576064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATA GCCAATTCGT TGCCCTGACC CATTCCTCCA CCTTGCGTCG CCTGCTCTAC
GAGGCGCTGA CCGCCCTGGG GCTGGATCCC ACCGACACCT ATCGGCGCGC CTATGCCGGC
GCGGCGCTGG CCGCGCCGCT GCTGGAGGCG CGAGAGGACC ACGACAGCGC TCCGCGCTTC
TGGCAGGCGC TGGAGGGCAT CAGCGGCGAC GTCGACATCG GTCTGCACCT GGGGGAGGTG
ATGCAGCCGC GTCCGATGGA CGTGGTCGGC TACCTGCTGC TGGCGGCGCG GGATCTGCGC
CAGGGCCTGC AGGCCTTCGT GCGCTTCCAG CACATACTGT CCGGCGGTTT CGCCGCCCGT
CTGGAGGAGC AGGGCGAGCA GGCGCGGCTG ATCATCGACC TCAACTACCG CGGGGTTGGC
TCGCTGCGCC AGCAGATGGA ATGCCTGGCC GTGCTGCTGG CGAAGATGCT CACCGCAGCC
GCTGGCGAGC TGCCCCTGCT GGGCGTCGAT TTCCGCCACC GCGCGCCGCG CCGGCTTGCC
GAGCACCGGC GCCTGCTGGG TGTCGAGCCG CGTTTCGCCC AGCCGCACGA TGCGCTGATC
CTGCCGCGCG CGATGCTCGC TCGGCCGTCG CGCAGCGCCA GCCCCAGGCT GTTCGAGGTG
CTCAGTGCAG AGGCCGAGAG GCAGTTGGCC GAGCTGGTGG AGAACCAGTT GCTGGCTCGG
GTGCGCTACT GGCTGGAGCT GAATCTCGGC TCTGCGCCCT GCACCCTGGA ACACTGTGCA
TCGGCGTTGG GCAGTAGACG CGGCGCCCTG CAGAAGGCGC TGAGCGAGCA GGGCAGCAGC
TTTCGTGCTC TGCACGACGA AGTGCGTCGC TTGCGCGCGC TGCGTCTGCT GGATCAGGGG
CTGGGGGTGC GTGAGGTGGC GCGCGCCTGT GGATTCGCCG AGCTGTCGCC GTTCTACCGC
GCCTTTCGCC GCTGGCAGGG CGGCACGCCG CGAGGTCTGG CGCCGCGTCA CGGTTCGCAT
GGAGCGTGA
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| Protein sequence | MADSQFVALT HSSTLRRLLY EALTALGLDP TDTYRRAYAG AALAAPLLEA REDHDSAPRF
WQALEGISGD VDIGLHLGEV MQPRPMDVVG YLLLAARDLR QGLQAFVRFQ HILSGGFAAR
LEEQGEQARL IIDLNYRGVG SLRQQMECLA VLLAKMLTAA AGELPLLGVD FRHRAPRRLA
EHRRLLGVEP RFAQPHDALI LPRAMLARPS RSASPRLFEV LSAEAERQLA ELVENQLLAR
VRYWLELNLG SAPCTLEHCA SALGSRRGAL QKALSEQGSS FRALHDEVRR LRALRLLDQG
LGVREVARAC GFAELSPFYR AFRRWQGGTP RGLAPRHGSH GA
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