Gene Pmen_4216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4216 
Symbol 
ID5106640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4620643 
End bp4621389 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content71% 
IMG OID640505480 
Producthypothetical protein 
Protein accessionYP_001189695 
Protein GI146309230 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTGA TCGTTCTTGC CTGGCGCCCC GATCATCCGC AGCCGCTGCT GCTGGCCGCC 
AATCGTGACG AGTTCTATAG CCGCCCAACC TGGCCCCTGC GCGAATGGGA AGATGCCCCC
GGTCTGTTCG CCGGACGCGA CCTGCAGGCA GGCGGCACCT GGCTGGGGGT AACCGCGGAC
GGGCGCTTCG CCGCGCTGAC CAATATCCGC GACCCCAGCC AGCCGCCCGG GCGGCGCTCG
CGCGGCGAGC TGCCGATCGA CTTCCTGCGC AGCGCGCTGG AGCCCCAGGC CTACCTGCAG
CGAGTGGCGG ACAAAGCCGC GGATTACGCC GGCTTCAACC TGCTGCTCGG TGATAGGCGA
CAGCTCTGGT ACTACAACAG CCAGGAAGAC CAGCCGCACG CCCTGGCGGA AGGTCTCTAC
GGCCTGTCCA ACGCCAGACT CGACAGCCCC TGGCCCAAGC TGCAGCGGGC CAAGGCCGCG
CTGGAGAATT GCCTGGACGC ACCGGACAGC GAGCGCCTGC TGGCCCTGCT GGCAGACACC
ACGCAGCCCG CCGAGCACCT GCTGCCCGAT ACCGGCGTCG GCCCGGCGGT GGAGCGCCTG
CTGGCCACCA GCTTCATCGC CAGCGCCAAC TACGGCACGC GCGCCAGCTC GGCGCTGCTG
CTCGGCGCCG ATGGCAGCTG GGAACTGGTC GAGCGCAGCT TCGGCCCCCA CGGCGCGCCG
CTGGGCGAGG TTGCCGTGCG CAGGTAG
 
Protein sequence
MCLIVLAWRP DHPQPLLLAA NRDEFYSRPT WPLREWEDAP GLFAGRDLQA GGTWLGVTAD 
GRFAALTNIR DPSQPPGRRS RGELPIDFLR SALEPQAYLQ RVADKAADYA GFNLLLGDRR
QLWYYNSQED QPHALAEGLY GLSNARLDSP WPKLQRAKAA LENCLDAPDS ERLLALLADT
TQPAEHLLPD TGVGPAVERL LATSFIASAN YGTRASSALL LGADGSWELV ERSFGPHGAP
LGEVAVRR