Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4216 |
Symbol | |
ID | 5106640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4620643 |
End bp | 4621389 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640505480 |
Product | hypothetical protein |
Protein accession | YP_001189695 |
Protein GI | 146309230 |
COG category | [S] Function unknown |
COG ID | [COG3332] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCCTGA TCGTTCTTGC CTGGCGCCCC GATCATCCGC AGCCGCTGCT GCTGGCCGCC AATCGTGACG AGTTCTATAG CCGCCCAACC TGGCCCCTGC GCGAATGGGA AGATGCCCCC GGTCTGTTCG CCGGACGCGA CCTGCAGGCA GGCGGCACCT GGCTGGGGGT AACCGCGGAC GGGCGCTTCG CCGCGCTGAC CAATATCCGC GACCCCAGCC AGCCGCCCGG GCGGCGCTCG CGCGGCGAGC TGCCGATCGA CTTCCTGCGC AGCGCGCTGG AGCCCCAGGC CTACCTGCAG CGAGTGGCGG ACAAAGCCGC GGATTACGCC GGCTTCAACC TGCTGCTCGG TGATAGGCGA CAGCTCTGGT ACTACAACAG CCAGGAAGAC CAGCCGCACG CCCTGGCGGA AGGTCTCTAC GGCCTGTCCA ACGCCAGACT CGACAGCCCC TGGCCCAAGC TGCAGCGGGC CAAGGCCGCG CTGGAGAATT GCCTGGACGC ACCGGACAGC GAGCGCCTGC TGGCCCTGCT GGCAGACACC ACGCAGCCCG CCGAGCACCT GCTGCCCGAT ACCGGCGTCG GCCCGGCGGT GGAGCGCCTG CTGGCCACCA GCTTCATCGC CAGCGCCAAC TACGGCACGC GCGCCAGCTC GGCGCTGCTG CTCGGCGCCG ATGGCAGCTG GGAACTGGTC GAGCGCAGCT TCGGCCCCCA CGGCGCGCCG CTGGGCGAGG TTGCCGTGCG CAGGTAG
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Protein sequence | MCLIVLAWRP DHPQPLLLAA NRDEFYSRPT WPLREWEDAP GLFAGRDLQA GGTWLGVTAD GRFAALTNIR DPSQPPGRRS RGELPIDFLR SALEPQAYLQ RVADKAADYA GFNLLLGDRR QLWYYNSQED QPHALAEGLY GLSNARLDSP WPKLQRAKAA LENCLDAPDS ERLLALLADT TQPAEHLLPD TGVGPAVERL LATSFIASAN YGTRASSALL LGADGSWELV ERSFGPHGAP LGEVAVRR
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