Gene Pmen_4207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4207 
Symbol 
ID5106631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4611860 
End bp4612387 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content62% 
IMG OID640505471 
Productlactoylglutathione lyase 
Protein accessionYP_001189686 
Protein GI146309221 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID[TIGR00068] lactoylglutathione lyase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCG ACGAGCTCAA CGCCATTCCC GGCGTGACCG CCAAGCCCGA CGTCGCCACC 
GCCGACTTCG TCTACAACCA CACCATGATC CGCGTGAAGG ATCTGCAGAA ATCCCTGGAC
TTCTACACCC GCGTGCTGGG CTTCACCCTG CTGGAGAAGA AGGATTTCCC CGACGCCGAG
TTCAGCCTGT ACTTCCTCGC CTTGATCGCC GACAAATCGC AGATCCCCAC CGATCCGGCC
GCCCGCCATC AGTGGCGCAA GTCCATCCCC GGCGTGCTGG AGCTGACCTA TAACTACGGC
ACCGAGAAAG ACCCGGAATT TGCCTACCAC AGCGGCAACA GCGACCCGCG CGGCTTTGGC
CACCTGTGCG TGTCGGTGCC GGACATCAAG GCGGCCTGCC AGCGTTTCGA AGACCTCGGC
GTGCCCTTCC AGAAGCGCCT GACCGACGGG CGCATGCGCG ACATCGCCTT TATCAAGGAC
CCGGACGGCT ACTGGGTGGA GATCATCCAG TTCACCGAAG TGATCTGA
 
Protein sequence
MTPDELNAIP GVTAKPDVAT ADFVYNHTMI RVKDLQKSLD FYTRVLGFTL LEKKDFPDAE 
FSLYFLALIA DKSQIPTDPA ARHQWRKSIP GVLELTYNYG TEKDPEFAYH SGNSDPRGFG
HLCVSVPDIK AACQRFEDLG VPFQKRLTDG RMRDIAFIKD PDGYWVEIIQ FTEVI