Gene Pmen_4199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4199 
Symbol 
ID5106623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4601845 
End bp4603044 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content66% 
IMG OID640505463 
ProductSAM-dependent methyltransferase 
Protein accessionYP_001189678 
Protein GI146309213 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCC TGCCCAGCCT GCGCCTGAAA GCCAACGCCG ACCGACGCCT GCGCGCCGGC 
CATCTGTGGG TCTACAGCAA CGAGATCGAT GTGGCCGCTA CGCCGCTGCA CGGTTTTGCC
GCTGGCGACC AGGCCCTACT CGAAGCGGCC GGCGGCAAGC CGCTGGGCAT CGTTGCCATG
AGCCCGAACA ACCTGATCTG CGCCCGCCTG CTGTCGCGCG ACGTCAAGCA CGTGCTGGAC
AAGTCGCTGC TGGTACACCG GCTCAACGTC GCCCTGAGCC TGCGCGAGCG CCTGTTCGAC
AAGCCCTGCT ACCGCCTGGT GTATGGCGAC TCCGACCTGC TGCCGGGTCT GGTGGTCGAC
CGTTTCTTCG ACATCCTAGT GGTGCAGCTG GCCTCGGCCA CCATGGAGGC GCACAAGGAC
GACGTGCTCG CCGCGCTGAT CCAGGTGCTC AAGCCCAGCG GCATCCTGTT CAAGAACGAT
TCCAGCGCGC GCGACGCCGA AGGCCTCGAG CGCTACGTGG AAACCGCCTA CGGCCAGGTG
CCGGAGTGGG TCGCCCTGGA AGAGAACGGC GTGAAGTTCG AAGCGCCGGT GATCGAAGGG
CAGAAGACCG GCTGGTTCTA CGATCACCGC ATGAACCGCG CGCGCCTGGC GCCCTACGTC
AAGGGCAAGC GCGTGCTCGA CCTGTTCAGC TACATCGGCG GCTGGGGCGT GCAGGCGGCG
GCGTTCGGCG CCAGCGAAGT GTTCTGCGTG GACGCCTCCG GCTTCGCCCT CGACGGCGTG
GAGCGCAACG CCACGCTCAA TGGCTTCGCC GAAAAGATCA CCTGCGTGGA AGGCGACGTG
TTCGCCGCCT TGCGGGAGCT GAAATCCGCC GAAGAGCGCT TCGACGTGGT GATCGCCGAT
CCACCCGCCT TCATCAAGCG CAAGAAGGAC ATCAAGAACG GCGAGGCCGC CTACCGCCGC
CTCAACGAAA TCGCCATGCG CCTGCTCAAC AAGGACGGCA TCCTGGTCAG CGCCAGCTGC
TCCATGCACC TGGAGGAGGA CAACCTGCAG AACATCCTGC TGACCAGCGC ACGCCATCTG
GATCGCAACA TCCAGCTGCT CGAGCGCGGC GCCCAGGGCC CGGATCACCC GGTGCACCCG
GCCATCGCCG AGACGCGCTA TATCAAGAGC CTGACCGTAC GCCTGCTGCC GAACAGCTGA
 
Protein sequence
MSSLPSLRLK ANADRRLRAG HLWVYSNEID VAATPLHGFA AGDQALLEAA GGKPLGIVAM 
SPNNLICARL LSRDVKHVLD KSLLVHRLNV ALSLRERLFD KPCYRLVYGD SDLLPGLVVD
RFFDILVVQL ASATMEAHKD DVLAALIQVL KPSGILFKND SSARDAEGLE RYVETAYGQV
PEWVALEENG VKFEAPVIEG QKTGWFYDHR MNRARLAPYV KGKRVLDLFS YIGGWGVQAA
AFGASEVFCV DASGFALDGV ERNATLNGFA EKITCVEGDV FAALRELKSA EERFDVVIAD
PPAFIKRKKD IKNGEAAYRR LNEIAMRLLN KDGILVSASC SMHLEEDNLQ NILLTSARHL
DRNIQLLERG AQGPDHPVHP AIAETRYIKS LTVRLLPNS