| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4189 |
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| Symbol | |
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| ID | 5106613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4592133 |
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| End bp | 4593746 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505453 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001189668 |
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| Protein GI | 146309203 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGAA GAGAGCCTGA AATGCCCGTA CCCGATCTGT TCAAGCAAGG CCTGGCCAGG
GGCTGGAAGA CATACGACGG TTCGCGCCTG GAAAACGACC TGACGCTGGA AGCCGATGTC
GCCATCGTCG GCAGCGGCGC CGGTGGCGGC ACCACGGCGG AAATCCTCAG CGCCGCCGGT
TACAAGGTGC TGCTGATCGA GGAAGGTCCG CTCAAGACCA GCGACGACTT CAAGATGCGC
GAGGCCGATG CCTACCCGAC CCTCTATCAG GAGGGCATCG GGCGCATGAG CAAGGACGGC
GCCATCACCA TCCTGCAGGG CCGCGCCGTT GGGGGTACCA CGCTGGTCAA CTGGACCAGC
AGCTTCCGCA CGCCGCCGCA GACCCTGGCG CACTGGGCCG AGGTGCATGG AGTGGAGGGC
CATGACGTCG AGTCCATGGC GCCCTGGTTC GAGAAGATGG AGCAGCGCCT GGGCGTGGCG
CCCTGGGCGG TGCCACCGAA TGCCAACAAC GAGGTGCTGC GCAGCGGTTG CGACAAGCTC
GGCTATCACT GGGCGCCGAT CCCGCGCAAC GTGCGCGGCT GCTGGAACCT CGGCTACTGC
GGCATGGGCT GCCCGACCAA CGCCAAGCAG TCGATGCTGG TCACCACCAT CCCCGCCACC
CTCGACGCCG GCGGCGAGCT GCTCTACCTG GCGCGCGCCG ACAGGCTGCT GATCGAAGGC
GACAAGGTGG TCGGCATCGA CTGCCTGGGC ATGGACGAAC GCTGCGTGGC GCCCAACGGC
AAGCGCATCC GGGTCAAGGC GCGGCATTAC GTGCTGGCCG GCGGCGGCAT CAACACCCCC
GGCATCCTGC TGCGCTCCAA TGCGCCCGAC CCGCACCAGC GCGTCGGCCG GCGCACCTAC
CTGCACCTGG TGAACTTCTC CGCGGCGCAG TTCGAGCAGG TCATCAACCC CTTCTACGGT
GCGCCGCAGT CGGTCTATTC CGACCATTTC CAGTGGGACG ACGGCACCGG CGGGCGCCTT
TCCTACAAAC TGGAAGTGCC GCCGCTGCAA CCGGCACTGA CCGCTACCCT GCTCGGCGAC
TTCGGTCGCG AGAATGCCCT GCGCATGGCG CAACTGCCGC ACACCAACGT GATGCTCGCC
CTGCTGCGCG ACGGCTTCCA CGAAGACAGT GCCGAAGGCC GCGTCGAGCT GCGCGGCGAT
GGCAGCCCGG TGCTCGACTA TCAGATGACC GATTACACCT GGGACGGCGT GCGCCGCGCC
TACCTGACCA TGGCGGAAAT CCAGTTCGCC GCCGGTGCCA AGGCGGTGAT GCCGACCCAT
GCCGATGCGC GTTACGTCGG CAGCTGGAAG GAGGCCCGGG ACATGATCGA GAACCTCGAC
CTGGCGCTCT ATCGCACCCG CCTGGGCAGC GCCCACGTGA TGGGCGGCTG CGCCATGGGC
GAGGATGCGC AGCAGGCAGT GGTCGACAGC CTCGGCCGCC ACCATCACCT GGCCAACCTG
TCGATCCACG ACGGCTCGCT GTTCCCCACC AGCATCGGCG CCAACCCGCA GCTGTCGATC
TATGGCCTGA CCGCCAAGCT CGCCACCCTG CTGGGCGAAC GCCTGAGGGC CTGA
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| Protein sequence | MTRREPEMPV PDLFKQGLAR GWKTYDGSRL ENDLTLEADV AIVGSGAGGG TTAEILSAAG
YKVLLIEEGP LKTSDDFKMR EADAYPTLYQ EGIGRMSKDG AITILQGRAV GGTTLVNWTS
SFRTPPQTLA HWAEVHGVEG HDVESMAPWF EKMEQRLGVA PWAVPPNANN EVLRSGCDKL
GYHWAPIPRN VRGCWNLGYC GMGCPTNAKQ SMLVTTIPAT LDAGGELLYL ARADRLLIEG
DKVVGIDCLG MDERCVAPNG KRIRVKARHY VLAGGGINTP GILLRSNAPD PHQRVGRRTY
LHLVNFSAAQ FEQVINPFYG APQSVYSDHF QWDDGTGGRL SYKLEVPPLQ PALTATLLGD
FGRENALRMA QLPHTNVMLA LLRDGFHEDS AEGRVELRGD GSPVLDYQMT DYTWDGVRRA
YLTMAEIQFA AGAKAVMPTH ADARYVGSWK EARDMIENLD LALYRTRLGS AHVMGGCAMG
EDAQQAVVDS LGRHHHLANL SIHDGSLFPT SIGANPQLSI YGLTAKLATL LGERLRA
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