Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4185 |
Symbol | |
ID | 5106609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4588660 |
End bp | 4589139 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640505449 |
Product | response regulator receiver protein |
Protein accession | YP_001189664 |
Protein GI | 146309199 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCACC CAGCGCCCGC CGACGATTTT CGTATCCTGG TGATCGACGA TCAGCCCGCC AACCTCGAAC TGGTGGAACA ACTGCTGGCC CGCGAGGGCC TGCACAACGT GCTCAGCTGC ACCGACCCGG CCCAGGCGCT GGCCCTGTTC AGCAGCTTCG AGCCGGACCT GCTGATTCTC GATCTGCACA TGCCCGGCCT GGACGGCTTC GCCGTGCTCG AACAGTTGCA GCGGCGCATT CCCGCCGACG ATTACCTGCC GATTCTGGTG CTCACCGCCG ATGCCACCCG CGAGGCCCGG CTGCGTGCCC TGGCGCTGGG CGCGCGCGAC TTCATCAGCA AGCCGCTGGA TGCCATCGAG ACCCTGCTGC GGGTGTGGAA CCTGCTGGAA ACCCGCGCGC TGTACCGCCA GTTACGGCGC CTGCAACCCG ATCAGCAACC CTTGCGGGCC AGACCCATGG CGCTGGGCAA CAGTAGCTGA
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Protein sequence | MNHPAPADDF RILVIDDQPA NLELVEQLLA REGLHNVLSC TDPAQALALF SSFEPDLLIL DLHMPGLDGF AVLEQLQRRI PADDYLPILV LTADATREAR LRALALGARD FISKPLDAIE TLLRVWNLLE TRALYRQLRR LQPDQQPLRA RPMALGNSS
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