Gene Pmen_4185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4185 
Symbol 
ID5106609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4588660 
End bp4589139 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content66% 
IMG OID640505449 
Productresponse regulator receiver protein 
Protein accessionYP_001189664 
Protein GI146309199 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACC CAGCGCCCGC CGACGATTTT CGTATCCTGG TGATCGACGA TCAGCCCGCC 
AACCTCGAAC TGGTGGAACA ACTGCTGGCC CGCGAGGGCC TGCACAACGT GCTCAGCTGC
ACCGACCCGG CCCAGGCGCT GGCCCTGTTC AGCAGCTTCG AGCCGGACCT GCTGATTCTC
GATCTGCACA TGCCCGGCCT GGACGGCTTC GCCGTGCTCG AACAGTTGCA GCGGCGCATT
CCCGCCGACG ATTACCTGCC GATTCTGGTG CTCACCGCCG ATGCCACCCG CGAGGCCCGG
CTGCGTGCCC TGGCGCTGGG CGCGCGCGAC TTCATCAGCA AGCCGCTGGA TGCCATCGAG
ACCCTGCTGC GGGTGTGGAA CCTGCTGGAA ACCCGCGCGC TGTACCGCCA GTTACGGCGC
CTGCAACCCG ATCAGCAACC CTTGCGGGCC AGACCCATGG CGCTGGGCAA CAGTAGCTGA
 
Protein sequence
MNHPAPADDF RILVIDDQPA NLELVEQLLA REGLHNVLSC TDPAQALALF SSFEPDLLIL 
DLHMPGLDGF AVLEQLQRRI PADDYLPILV LTADATREAR LRALALGARD FISKPLDAIE
TLLRVWNLLE TRALYRQLRR LQPDQQPLRA RPMALGNSS