Gene Pmen_4181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4181 
Symbol 
ID5106605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4583811 
End bp4584317 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content64% 
IMG OID640505445 
Productcalcium/calmodulin dependent protein kinase II association-domain-containing protein 
Protein accessionYP_001189660 
Protein GI146309195 
COG category[S] Function unknown 
COG ID[COG4875] Uncharacterized protein conserved in bacteria with a cystatin-like fold 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAAC CCTTGTTCAG CGGCTGCGCC CTGGTGTTCG CCCTGTCCAT GCCGCTGGTT 
CAGGCGGCCG AGGCGCCTTA TGTCTACAAG GAAACCGCAG CCGCCCCGAG CGATGCGCAG
GAGCAGCAGA TCGCCAGCCT GTTCGAGCGC TGGAACGCTG CCCTGCAGAC GGGCGACTCG
GCCAAGGTGG CTGCGCTCTA TGCCGACAAC GGCGTGCTGC AGCCCACGGT ATCGAATCGG
GTGCGCGTAG GCCACGAGGC GATCCAGGAC TATTTTGACC ATTTCTTACA GGCCAAGCCG
GTGGGCACGA TCAACATGCG TGAAATTCGC CAGATCGGCC CGGATGCGGC GGTGGACTCG
GGGGTCTACA CCTTCGCCCT GACCCAGGGC GATGCGGTAC GCCAGGTGCA GGCGCGCTAC
ACCTTCGTGT ACCAGAAGGT CGATGGCGAG TGGAAAATCC TCAAGCACCA CTCCTCGGCG
ATGCCGGAGC AGCCTGCGGC CGGCTGA
 
Protein sequence
MLKPLFSGCA LVFALSMPLV QAAEAPYVYK ETAAAPSDAQ EQQIASLFER WNAALQTGDS 
AKVAALYADN GVLQPTVSNR VRVGHEAIQD YFDHFLQAKP VGTINMREIR QIGPDAAVDS
GVYTFALTQG DAVRQVQARY TFVYQKVDGE WKILKHHSSA MPEQPAAG