Gene Pmen_4153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4153 
Symbol 
ID5105672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4556151 
End bp4556447 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content66% 
IMG OID640505417 
Producthypothetical protein 
Protein accessionYP_001189632 
Protein GI146309167 
COG category[S] Function unknown 
COG ID[COG1872] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00251] conserved hypothetical protein TIGR00251 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.711245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTACT TTCGCTGGGA CGGCGAGGAC CTGATCCTCG ACTGTCACCT GCAGCCCAAG 
GCGAGCAAGG ACGAGTTCGC CGGGCTGCAT GGTGAGCGGC TGAAGATCCG CCTCACCGCC
CCGCCGGTCG AGGGCAAGGC CAATGCCCAT CTGCTGGCCT TTCTGGCCAA GGCCTTCGGC
GTCGCCAAGG CCCAGGTCAG CCTGGAAAGC GGCGAGCTCA ACCGTCACAA GCGCTTGCGC
ATTCACGCGC CGCAGCGCCT GCCCACGCTG CCTGGGCTGA TCTTTCCCGG GAAGTGA
 
Protein sequence
MSYFRWDGED LILDCHLQPK ASKDEFAGLH GERLKIRLTA PPVEGKANAH LLAFLAKAFG 
VAKAQVSLES GELNRHKRLR IHAPQRLPTL PGLIFPGK