| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4126 |
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| Symbol | |
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| ID | 5105645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4523782 |
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| End bp | 4524981 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505390 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001189605 |
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| Protein GI | 146309140 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR02819] formaldehyde dehydrogenase, glutathione-independent |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATA ATCGTGGTGT GGTTTACCTC GGCGCGGGCA AGGTCGAAGT GCAGAAGATC
GACTACCCGA AAATGCAGGA CCCGCGTGGT AAGAAGATCG AGCACGGGGT CATCCTGAAA
GTCGTTTCCA CCAATATCTG CGGCTCCGAC CAGCACATGG TGCGAGGTCG TACCACCGCT
CAGGTCGGCC TGGTTCTGGG CCACGAGATC ACCGGCGAGG TGATCGAGAA GGGCCGCGAC
GTCGAGCGTC TGCAGATCGG TGACCTGGTT TCGGTGCCCT TCAACGTCGC CTGCGGTCGC
TGCCGCAGCT GCAAGGAACA GCACACTGGC GTCTGCTTGA CCGTCAACCC GGCGCGTGCC
GGCGGTGCCT ACGGCTACGT CGACATGGGC GACTGGACCG GTGGCCAGGC CGAATACGTG
CTGGTGCCCT ACGCCGACTT CAACCTGCTC AAGCTGCCGG ATCGCGACAA GGCCATGGAG
AAGATCCGCG ACCTGACCTG CCTGTCCGAC ATTCTGCCCA CCGGCTACCA CGGCGCGGTC
ACCGCCGGCG TCGGCCCGGG CTCCACCGTC TACGTCGCCG GTGCCGGCCC GGTCGGTCTG
GCTGCCGCCG CCTCGGCGCG TCTGCTCGGC GCTGCCGTGG TCATCGTCGG TGACCTCAAC
CCGGCCCGTC TGGCCCATGC CAAGGCGCAG GGCTTCGAGA TCGCCGACCT GTCGCTGGAT
ACGCCGCTGC ACGAGCAGAT CGCCGCGCTG CTGGGCGAGC CGGAAGTCGA TTGCGCCATC
GACTGCGTGG GCTTCGAGGC CCGTGGTCAT GGTCACGAAG GTGCCAAGCA CGAGGCCCCG
GCCACCGTGC TCAACTCACT GATGCAGGTC ACCCGCGTCG CCGGCAAGAT CGGCATCCCC
GGTCTGTACG TCACCGAAGA CCCGGGCGCG GTGGACGCCG CGGCGAAGAT CGGCAGCCTG
AGCATCCGCT TCGGCCTCGG CTGGGCCAAG TCGCACAGCT TCCACACCGG CCAGACCCCG
GTGATGAAGT ACAACCGCGC GCTGATGCAG GCCATCATGT GGGATCGCCT CAACATCGCG
GAGATCGTCG GCGTACAGGT CATCAGCCTG GACGACGCAC CGCGCGGTTA CGGCGAGTTC
GACGCAGGCG TGCCGAAGAA ATTCGTCATC GACCCGCACA AGATGTTCAG CGCTGCCTGA
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| Protein sequence | MSDNRGVVYL GAGKVEVQKI DYPKMQDPRG KKIEHGVILK VVSTNICGSD QHMVRGRTTA
QVGLVLGHEI TGEVIEKGRD VERLQIGDLV SVPFNVACGR CRSCKEQHTG VCLTVNPARA
GGAYGYVDMG DWTGGQAEYV LVPYADFNLL KLPDRDKAME KIRDLTCLSD ILPTGYHGAV
TAGVGPGSTV YVAGAGPVGL AAAASARLLG AAVVIVGDLN PARLAHAKAQ GFEIADLSLD
TPLHEQIAAL LGEPEVDCAI DCVGFEARGH GHEGAKHEAP ATVLNSLMQV TRVAGKIGIP
GLYVTEDPGA VDAAAKIGSL SIRFGLGWAK SHSFHTGQTP VMKYNRALMQ AIMWDRLNIA
EIVGVQVISL DDAPRGYGEF DAGVPKKFVI DPHKMFSAA
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