Gene Pmen_4116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4116 
Symbol 
ID5105635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4513894 
End bp4514352 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content59% 
IMG OID640505380 
Producthypothetical protein 
Protein accessionYP_001189595 
Protein GI146309130 
COG category[S] Function unknown 
COG ID[COG4339] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGGT GGGGTTTATG GAGCGGATAC GTTGCAGTTG CGCTTTGGTT TCATGACGCG 
ATCTACGATG TGCGTGGCAA GACCAACGAG CGCCAAAGCG CGGACTGGGC AATTCGCACG
CTCGCCGCAT GCAAGGCCGA TCAGGCGACG CTGGAGCGCG TCGAGCAGTT GATATTGGCC
ACCAAGCATG ACGCAACGCC CATCCGGCCG GACGAACAAC TGCTCGTCGA CATCGATCTT
GCCATCCTTG GCGCGCGCCC CCAACGCTTC GCCGAGTACG ACCAACAGGT GCGGGCCGAG
TACAGCTGGG TGCCTGGCCT CCTGTACAGG ATGAAGCGTC GAAGCGTGCT CAAGTCATTT
CTTGCACGCC CCAGCATCTA CAGCACCAGC TATTTCAGGG AACGCAATGA ATCACAGGCG
AGAGTCAACT TGTCGGGGAT TGTCGGGCCA ATCAGCTAA
 
Protein sequence
MGRWGLWSGY VAVALWFHDA IYDVRGKTNE RQSADWAIRT LAACKADQAT LERVEQLILA 
TKHDATPIRP DEQLLVDIDL AILGARPQRF AEYDQQVRAE YSWVPGLLYR MKRRSVLKSF
LARPSIYSTS YFRERNESQA RVNLSGIVGP IS