| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4111 |
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| Symbol | |
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| ID | 5105630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4508540 |
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| End bp | 4510840 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640505375 |
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| Product | helicase c2 |
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| Protein accession | YP_001189590 |
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| Protein GI | 146309125 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.620969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCTGC GCATCGCCGT GCGCGAGCTG TGCGAGTTCA CCGCCAAGGA AGGCGACCTC
GACCTGCGCT TCACCCCCTC GCCCACCGCT CAGGAGGGTA TCGCGGGGCA TGCCACGGTG
GTCGCCCGGC GCGGCCCCGA CTATATGTCC GAGCTGGCCG TAAGTGGCGA GTTCGAGGAA
CTGACGGTCA GCGGCCGCAT CGACGGCTTC GACCCCGAGT TTCGCCTGCT GGAAGAGATC
AAGACCCACC GCGGCGACGT CGCGCGCATC CCGGCCAACC ACCGCCTGCT GCACTGGGCG
CAGGTCAAGG TCTACGGCTG GCTGCTGTGC CAGGCGCTGG AACTCGATGA GCTGGACCTG
GCGGTGGTGT ACTTCAACGT CATCAGCCAG AAGGAAACGG TGTTTCGCGA GCGCCATAGC
GCCGAGGCAC TGCGCCAGTT CTTCGAGCTG CAATGCCGCC GCTATATCCA CTGGGCGCGC
CAGGAGCAGG CCCATCGCCT GGCGCGCGAC GCAGCGCTGA CCACGCTGCG CTTTCCCTAC
GCCGAATTTC GCCATGGTCA GCGGCAGCTG GCCGAGGCCG TCTACCGCGC CGCGCGCGAC
GGCCATTACC TGCTGGCGCA GGCCACCACC GGCATCGGCA AGACCCTCGG CACCCTGTTC
CCGCAACTCA AGGCCATGCC CGGCCAGCAG CTCGATCGCC TGTTCTTCCT CAGCGCCAAG
ACCCCGGGGC GGCGCCTGGC GCTGGACGCC CTGCAGCGCC TGCGCGACCC CGAGACGCCG
CTGCGGGTGC TGGAGCACGT GGCCCGCGAC AAGGCCTGCG AGCACCCGGA CAAGGCCTGC
CATGGCGAGT CCTGCCCGCT GGCCAGGGGC TTCTACGACC GCCTGCCGGC GGCGCGCAGC
GCGGCGCTGA AGGAACGCTG GCTAGATCAG CAGGCCGTGC GTGAGATCGC CATCGCCCAC
GGCATCTGCC CCTACTACCT GAGCCAGGAG CTGTGCCGCT GGAGCGACGT GGTGGTGGGC
GACTACAACT ACTACTTCGA CCTCGGCGCC CTGCTGCACA GCCTGACCCT GGTCAACCAG
TGGCGCGTCT GCCTGCTGGT GGACGAGGCG CACAACCTGG TCGAACGCGG CCGCAGCATG
TACAGCGCCG AGCTGGACCA GGCGCGCTTC AAGGCCATGC GCCGCGACGC CCCGGCCAAG
CTCAAAGGCG TGCTGGGGCG GGTCGACCGC CACTGGAATC AGCTGCACCG CGAGCAGCAG
GTGCCTTACC AGGTCCATCC GCTGGCGCCG GACCTGCTGC TCGCCGCCCT GGGCAAGGCG
GTCAGCGCCA TCACCGATCA TCTGACCGAC CAGCCCGAGG GCAACGCCGG CGAACTGCTG
CGTTTCTACC TCGACGCCAT GCTGTTCTGC CGCCTGGCCG AGAGCTTCGG CCCGCATTCG
CTGTTCGACA TCAGCCGCGT CGAGGGCGAC AAGGGCCGCA GCTACTCCAC CCTGTGCATC
CGCAACGTCC TGCCGGCGCC CTTTCTCGGC CCGCGCTTCG AGCAGGCGCA CAGCGCCACG
CTGTTCTCCG CCACCCTCAG CCCCAGCCAC TACTACCTCG ACCTGCTCGG CCTGCCGCAG
GAGACGCAGT GCCTGGACGT CGACTCGCCT TTTAGCGCCG AGCAGCTGCA GGTGCGCGCG
GTGCGCAACC TGTCGACCCG CTACCGCGAC CGCGACGCCT CGCTGGCGCC GATCTGCCGG
CTGATCGCCC GCCAGTACGG CGAACGGCCG GGCAACTACC TGGCCTTCTT CAGCAGCTAC
CAGTACCTGC AACAGGTGCT GGATCTGTTG GCCCGCGAGT ACCCCGAAAT TCCCGTCTGG
GTGCAGTCGC GGCAGATGGA CGAGGCGGCG CGCCAGGGCT TTCTCGAACG CTTTCAGGTC
GGCGGGCGCG GCATCGGCTT CGCCGTGCTC GGCGGGGTGT TCGGCGAAGG CGTCGACCTG
CCCGGCGAAC GCCTGATCGG CGCCTTCGTC GCCACTCTCG GCCTGGCCCA GGTCAACCCG
ATCAACGAGG AAATCCGCCA GCGCATGCAC GCGCTGTTCG GCGACGGTTA CGACTACACC
TACCTCTACC CCGGCCTGCA AAAGGTGGTG CAGGCCGCCG GTCGGGTGAT CCGCACCACC
GAGGACGAAG GTGTGCTCTA CCTGATCGAC GACCGCTTCG CCCGCCAGGA AGTGCGCCGC
CTGCTGCCGA GCTGGTGGCA GGTTGAGCTG CTGCGCTTGC CGCTACAAAC AGCTGTGCTG
GAGCCGCAAC CCGATCTGTA G
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| Protein sequence | MSLRIAVREL CEFTAKEGDL DLRFTPSPTA QEGIAGHATV VARRGPDYMS ELAVSGEFEE
LTVSGRIDGF DPEFRLLEEI KTHRGDVARI PANHRLLHWA QVKVYGWLLC QALELDELDL
AVVYFNVISQ KETVFRERHS AEALRQFFEL QCRRYIHWAR QEQAHRLARD AALTTLRFPY
AEFRHGQRQL AEAVYRAARD GHYLLAQATT GIGKTLGTLF PQLKAMPGQQ LDRLFFLSAK
TPGRRLALDA LQRLRDPETP LRVLEHVARD KACEHPDKAC HGESCPLARG FYDRLPAARS
AALKERWLDQ QAVREIAIAH GICPYYLSQE LCRWSDVVVG DYNYYFDLGA LLHSLTLVNQ
WRVCLLVDEA HNLVERGRSM YSAELDQARF KAMRRDAPAK LKGVLGRVDR HWNQLHREQQ
VPYQVHPLAP DLLLAALGKA VSAITDHLTD QPEGNAGELL RFYLDAMLFC RLAESFGPHS
LFDISRVEGD KGRSYSTLCI RNVLPAPFLG PRFEQAHSAT LFSATLSPSH YYLDLLGLPQ
ETQCLDVDSP FSAEQLQVRA VRNLSTRYRD RDASLAPICR LIARQYGERP GNYLAFFSSY
QYLQQVLDLL AREYPEIPVW VQSRQMDEAA RQGFLERFQV GGRGIGFAVL GGVFGEGVDL
PGERLIGAFV ATLGLAQVNP INEEIRQRMH ALFGDGYDYT YLYPGLQKVV QAAGRVIRTT
EDEGVLYLID DRFARQEVRR LLPSWWQVEL LRLPLQTAVL EPQPDL
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