| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4066 |
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| Symbol | |
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| ID | 5106363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4452834 |
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| End bp | 4453865 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640505330 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001189545 |
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| Protein GI | 146309080 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.138885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCA AGGGCAGCTG GTACGAACGC GACTGTCGCT TCATCGCCGC CCATCACCAG
CCGGCGCTGT TGCTCGACCT GGCCCTGGCC CGCGATCTGG ACAGCCACCG CCTGCTGCGC
GGTAGCGGCC TGTTCCATGA AGACATCCTC GGCGGCCAGG CATGCATCAG CCCGCAGCAG
TTTCTGCAGA TGATCGACAA CGCAAGGCGT CTGCTCGATG CCGACGACAG CAGCTTCCTG
TTCGGCCAGC GCCTGCTGCC GGGGCACTAC GGCGCGGCCA GCCAGGCCCT GCAACAGGCC
GGCAACCTGC AGCAGGCGCT GGAGCTGCTG GTGCGCCTGC GCGCGCTGCT CAGCCCGCTG
CTGGCACCGC GCCTGCTGCT CGACGAGCAG CGCGCCTACG TGGTGTGGCT GGATGCCTGC
GGCTGTGGCG AGCAGCGGCG CTTTCTGCTC GAGGCGAGCA TGACCGCGCT GGCCTCCTGC
AGCCGCTGGC TGGCCGGTGA GCGCCTGCCC TGGCATTTCG AATTCGCCCA CGCACAGCCG
CGCTACATCG AACAGTACTG GGCGCACCTG GGCGAGGACG TGGCGTTCGC GCGCCAGGTG
GACGTGATGA GCCTGCCGCG CGAATACCTG ACGCGGCCCT GGCCGGGCGC CTCGCTCACC
GCCGGGCGGG TGGCCGAACA GCAGAGCCTG GCGCAGTTGC AGGCGCTGGG CTTCTCCGCC
AGCCTGCTGG ATCGCCTGTA TGCCCACCTG CGCAGCCATA TCCGCCAGAC CCCGAACCTG
GACAGCGTGG CGCAGGCCTT CGGCATGAGC CCGGCCACCC TCAAGCGCAA GCTGGGCAAG
CATGACAGCC ATTTCCAGGA GCAGCTCGAT CTGGTGCGCA AGCACATCGC GCTGTACCTC
TACCGGGTCA AGGGCTACAG CAACGAGGAA GTGGCGGCCT ATCTGCAGTT CAACGACAGC
ACCAACTTCC GCCGCTCGTT CAAGCGCTGG ACCGGCCTGT CGCCCAGCGC GCTAAGGCAG
TTGCTGGGTT GA
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| Protein sequence | MAIKGSWYER DCRFIAAHHQ PALLLDLALA RDLDSHRLLR GSGLFHEDIL GGQACISPQQ
FLQMIDNARR LLDADDSSFL FGQRLLPGHY GAASQALQQA GNLQQALELL VRLRALLSPL
LAPRLLLDEQ RAYVVWLDAC GCGEQRRFLL EASMTALASC SRWLAGERLP WHFEFAHAQP
RYIEQYWAHL GEDVAFARQV DVMSLPREYL TRPWPGASLT AGRVAEQQSL AQLQALGFSA
SLLDRLYAHL RSHIRQTPNL DSVAQAFGMS PATLKRKLGK HDSHFQEQLD LVRKHIALYL
YRVKGYSNEE VAAYLQFNDS TNFRRSFKRW TGLSPSALRQ LLG
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