| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4061 |
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| Symbol | |
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| ID | 5106358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4445761 |
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| End bp | 4446210 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640505325 |
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| Product | biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_001189540 |
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| Protein GI | 146309075 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.603451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGGC CGCAGAGCAA GCATGGCCCC AAGGCCGAGA TGAACGTGGT GCCCTACATC
GACGTGATGC TGGTGCTGCT GGTGATCTTC ATGGTCACCG CGCCCATGCT CACCCAGGGG
GTGCATATCG AGCTGCCCAA GGTGGCCGCC GAGGCGCTGC CCAGCGATAA CCAGCAGCGC
ATCCTCACCC TGTCGGTGCA GGCCGACGGC AGCTACTACT GGAACCTCGG CAGCGAGCTG
GACACCGAAC TGGGCGCGGC CAGCGAACAG GCCGTGGACC TGGCGGTGAT GAGCGCGCGG
GTGGCGCAGC TGGTCGCCGA GCAGGGCGAC ACCCAGGTGT ACATCCGCGC CGACCAGGCC
GCCGACTACG CCAGTGTGGT GGCCGGCATC GCCGCCCTGC AGCAGGGCGG GGTGAGCAGC
CTGGGTCTGA TCACCGAGGC GCCGCAATGA
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| Protein sequence | MRRPQSKHGP KAEMNVVPYI DVMLVLLVIF MVTAPMLTQG VHIELPKVAA EALPSDNQQR
ILTLSVQADG SYYWNLGSEL DTELGAASEQ AVDLAVMSAR VAQLVAEQGD TQVYIRADQA
ADYASVVAGI AALQQGGVSS LGLITEAPQ
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