| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4032 |
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| Symbol | |
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| ID | 5106329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4411796 |
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| End bp | 4413130 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640505296 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_001189511 |
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| Protein GI | 146309046 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.716492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCTCG ACGTGCACGT CAGCTCCAGG CTTGTAGCCA AGCTGTATCG CGAACGGGAT
GAATATGTCC TGAAGTATCT TCCGGGCACT GCGCTGGAAG ATTTCGTCAG CCTCGCAATG
CCGGTTCGCG AAGAGCCCTG GCGCTGGCCA CGCGACCTCT TCCCGTTCTT TCGGCAGAAC
CTGCCCGAGG GGTATTTGCT AGGCGTCATC CGCGAAGAGT TCGGCCCACT GCTCGATGGT
ACTGACCTGT CACTGCTGGG CGTGGTGGGC GGCACCGGTA TCGGCAGAGT CTCGGTCACG
CCAGAGGGTG TTGAGCCTGG CGTCGAAATG GCGCCGCTGG AGATAGAACA CCTGCTCAAA
GCGGAAAACA CCAGCGAACG ATTCGCCGCA CTAGTGCGGC AATACGCTCG GGTCGCCGTA
TCGGGGGTCG TGCCAAAGTT CATTGCCACC GACGCCGTCG CCCCTCGGGA GCCACTGGGC
AAACCGACCG TGCGCACCGG CTTTCACATC ATCAAGGGCT CTGACGAAAC CACCCCTTTT
CTGGGCTTCA ACGAGTTCTA CACCATGCGC GTTCTGGAGC GACTGAATGT CGTGCCGGTC
GCTGCCTGCC GCATGTCTGA CGATGGCAAG GTACTGGTAG TGGATCGCTT CGACGTGGAC
GAACACGGCA TCCCCCGCTA CGGCGTCGAG GATGCCTGCG AGCTGCTGGG CTTGCCGCCC
CATGAAAAGT ACGCGCCCAC CACCGAGCGG GTGTGGAATG CCACACGCGC CTATATTCCC
GCTGACCGCC TACAAGCGCA GCGCGAGCAC CTGGGCTGGC ACCTGCTGAC CAACTACGTG
GTGCGCAATG CCGACTGCCA CGCGAAGAAC ATCGCGCTGT TCTACTCCTC CCGAGCGGAC
GTGGGCTTCA CGCCCGTCTA TGACCTGGTG ACCACTCAGG CCTACCCGCG CTTCGCCAGC
AACCCGCCTG GCCTGTCCGT TGGAGGCAGG CAAACCTGGA CACCGGGTCG ATCTCTGGAA
ACCTTCTTCA AGGCCGTGCT GGGCATTACC CCGAGCAAAT ACGCAGCCAT GCTCGAGCAA
CTCTGCGAAT CCGCCGTAGA GGTCGGCAAG GAAGTCATCG AAGCCGCAAA GAACGAGCCC
GCCTGGCGCG ACGTAGCCAA GCATATGGTG CATGCGTGGA ACGAAGGCAT GGAAACAGTC
CGCTGCCCCA AGGCCGCCCC GCACTTTCGT GGCCTCGATA GCGCCATCGA AGACGCCGGC
TTCTCCGGCC CGCGCAAACC TGAGCGCAGC AGAGAAGTGA TTGGCCGCTC CGAATTACTG
GCGAAGAAGC GCTGA
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| Protein sequence | MILDVHVSSR LVAKLYRERD EYVLKYLPGT ALEDFVSLAM PVREEPWRWP RDLFPFFRQN
LPEGYLLGVI REEFGPLLDG TDLSLLGVVG GTGIGRVSVT PEGVEPGVEM APLEIEHLLK
AENTSERFAA LVRQYARVAV SGVVPKFIAT DAVAPREPLG KPTVRTGFHI IKGSDETTPF
LGFNEFYTMR VLERLNVVPV AACRMSDDGK VLVVDRFDVD EHGIPRYGVE DACELLGLPP
HEKYAPTTER VWNATRAYIP ADRLQAQREH LGWHLLTNYV VRNADCHAKN IALFYSSRAD
VGFTPVYDLV TTQAYPRFAS NPPGLSVGGR QTWTPGRSLE TFFKAVLGIT PSKYAAMLEQ
LCESAVEVGK EVIEAAKNEP AWRDVAKHMV HAWNEGMETV RCPKAAPHFR GLDSAIEDAG
FSGPRKPERS REVIGRSELL AKKR
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