Gene Pmen_4006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4006 
Symbol 
ID5110229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4381193 
End bp4382170 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content67% 
IMG OID640505269 
Producthypothetical protein 
Protein accessionYP_001189485 
Protein GI146309020 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTTC ATTCACTAGC ACTGCTCGGT TTCTGCCTGC TCTCCTGCCC CGCAGCCTGG 
GCCGAGGAGC CTCCCGAGGA CGCGCCGGCT GATAGCGTCG ACGCCCCCGC TGCGAACGAG
CGTCCGCTGC TGCCCGAACG CAGCATCAGC GACGCGCAGA CGCTGGAGCA ACGCCTGGAC
AAACGTGAAC AGCAAATGCT GCAGGCTGGT GCCGAGAGCT TTCTCGCCCT GTGGCTGCCC
GCCAACGTCG GCGAACCCAG CGGCGCGGTG ATTCTGTTGC CCGGCGACGT GGAAAACGCC
GACGGCGCGG CCGCGGTCGG ACCGCTTCGG CGCAAGTTGC CGGATGCCGG CTGGCACAGC
CTGAGCATCA CCCTCCCCGA TCCGGATGGC GACCCGCTGC CGCCGCGTAC CGCCAACTCC
GAAACGCCCG CACCAGCTGG CGACGAAGCC AGCGACGCGG AGGCGGAAAG CGCTGCCAAT
GATTCGCCAG AGCCGACAGC CGCACCCGCC GCTCCGGAAA TCAGCCCCGA ACAGCGGCGC
CAGGCGCACG TCGAACGAGT CATGGCGCGC ATCGAGGCAG TCATCACCTT CGCCGACCAG
CAGCAGGCCA AGGAAATCGT GCTGCTGGGC CATGGCAGCG GAGCGTACTG GGCCGCCCGT
TACCTCAGTG AACGCAAGCC ACAGAACGTG CAGAACCTGC TGATGGTGGC CGCCGAGCTG
CCGGCAGGCT TCGCTCCGCC ACTGGACGAG TTGGTGGCGC AGCTGCCGGT GGCCACTGGC
GATTTCTACT ACAAGGATCA GGCGAGCGAG CGCCAGGCAG CCCTCAAGCG CCTGCAGGCC
AGCAAGCGTG CCAAGTTGCC TACTTATATA CAGGTGGCCA TGAAAGCCTT GCCCGGCAAC
CTGCCGGTTC AGGAGGAACA GTTGTATCGA CGCCTGCGCG GCTGGCTGCA ACTGCATATC
CGCGCCAGCG GCGGCTAG
 
Protein sequence
MRLHSLALLG FCLLSCPAAW AEEPPEDAPA DSVDAPAANE RPLLPERSIS DAQTLEQRLD 
KREQQMLQAG AESFLALWLP ANVGEPSGAV ILLPGDVENA DGAAAVGPLR RKLPDAGWHS
LSITLPDPDG DPLPPRTANS ETPAPAGDEA SDAEAESAAN DSPEPTAAPA APEISPEQRR
QAHVERVMAR IEAVITFADQ QQAKEIVLLG HGSGAYWAAR YLSERKPQNV QNLLMVAAEL
PAGFAPPLDE LVAQLPVATG DFYYKDQASE RQAALKRLQA SKRAKLPTYI QVAMKALPGN
LPVQEEQLYR RLRGWLQLHI RASGG