Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4006 |
Symbol | |
ID | 5110229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4381193 |
End bp | 4382170 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640505269 |
Product | hypothetical protein |
Protein accession | YP_001189485 |
Protein GI | 146309020 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTTC ATTCACTAGC ACTGCTCGGT TTCTGCCTGC TCTCCTGCCC CGCAGCCTGG GCCGAGGAGC CTCCCGAGGA CGCGCCGGCT GATAGCGTCG ACGCCCCCGC TGCGAACGAG CGTCCGCTGC TGCCCGAACG CAGCATCAGC GACGCGCAGA CGCTGGAGCA ACGCCTGGAC AAACGTGAAC AGCAAATGCT GCAGGCTGGT GCCGAGAGCT TTCTCGCCCT GTGGCTGCCC GCCAACGTCG GCGAACCCAG CGGCGCGGTG ATTCTGTTGC CCGGCGACGT GGAAAACGCC GACGGCGCGG CCGCGGTCGG ACCGCTTCGG CGCAAGTTGC CGGATGCCGG CTGGCACAGC CTGAGCATCA CCCTCCCCGA TCCGGATGGC GACCCGCTGC CGCCGCGTAC CGCCAACTCC GAAACGCCCG CACCAGCTGG CGACGAAGCC AGCGACGCGG AGGCGGAAAG CGCTGCCAAT GATTCGCCAG AGCCGACAGC CGCACCCGCC GCTCCGGAAA TCAGCCCCGA ACAGCGGCGC CAGGCGCACG TCGAACGAGT CATGGCGCGC ATCGAGGCAG TCATCACCTT CGCCGACCAG CAGCAGGCCA AGGAAATCGT GCTGCTGGGC CATGGCAGCG GAGCGTACTG GGCCGCCCGT TACCTCAGTG AACGCAAGCC ACAGAACGTG CAGAACCTGC TGATGGTGGC CGCCGAGCTG CCGGCAGGCT TCGCTCCGCC ACTGGACGAG TTGGTGGCGC AGCTGCCGGT GGCCACTGGC GATTTCTACT ACAAGGATCA GGCGAGCGAG CGCCAGGCAG CCCTCAAGCG CCTGCAGGCC AGCAAGCGTG CCAAGTTGCC TACTTATATA CAGGTGGCCA TGAAAGCCTT GCCCGGCAAC CTGCCGGTTC AGGAGGAACA GTTGTATCGA CGCCTGCGCG GCTGGCTGCA ACTGCATATC CGCGCCAGCG GCGGCTAG
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Protein sequence | MRLHSLALLG FCLLSCPAAW AEEPPEDAPA DSVDAPAANE RPLLPERSIS DAQTLEQRLD KREQQMLQAG AESFLALWLP ANVGEPSGAV ILLPGDVENA DGAAAVGPLR RKLPDAGWHS LSITLPDPDG DPLPPRTANS ETPAPAGDEA SDAEAESAAN DSPEPTAAPA APEISPEQRR QAHVERVMAR IEAVITFADQ QQAKEIVLLG HGSGAYWAAR YLSERKPQNV QNLLMVAAEL PAGFAPPLDE LVAQLPVATG DFYYKDQASE RQAALKRLQA SKRAKLPTYI QVAMKALPGN LPVQEEQLYR RLRGWLQLHI RASGG
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