| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4003 |
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| Symbol | |
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| ID | 5110226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4376649 |
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| End bp | 4377746 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505266 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001189482 |
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| Protein GI | 146309017 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACG ATGTACTGGT GAGCTTCCGC GGCGTGCAGA AGAGCTACGA TGGCGAGACG
CTGATCGTCA AAGACCTCAA CCTGGATATC CGCAAGGGCG AGTTCCTGAC CCTGCTCGGC
CCGTCCGGCT CCGGCAAGAC CACCAGCCTG ATGATGCTGG CCGGTTTCGA AACTCCCACC
GCCGGCGAGA TCCTCCTCGA CGGCCGTTCG CTGAACAAAC TGCCGCCGCA CAAGCGTGAC
ATCGGCATGG TGTTCCAGAA CTATGCGCTG TTCCCGCACA TGACCGTGGC CGAGAACCTC
GCCTTCCCGC TGAGCGTGCG CGGTATGTCG CGCACCGATA TCAGCGAGCG GGTCAAGCGC
GCGCTGTCCA TGGTGCAGCT CGACAGCTTC CGCAATCGTT ATCCGGGCCA GCTCTCCGGT
GGTCAGCAGC AGCGCGTGGC ACTGGCCCGT GCGCTGGTGT TCGAGCCGCA ACTGGTGCTG
ATGGACGAAC CCCTCGGCGC GCTGGACAAG CAACTGCGCG AACACATGCA GATGGAAATC
AAGCACCTGC ACCAGCGCCT GGGCGTGACC GTGGTCTACG TGACCCACGA CCAGGGCGAG
GCGCTGACCA TGTCCGACCG CGTGGCCGTA TTCCACCAGG GCGAGATCCA GCAGATCGCC
CCGCCGCGCG ACCTCTACGA GGCGCCGCAC AACACCTTCG TCGCCCAGTT CATCGGTGAG
AACAACCGCC TGGCCGGCGA GCTGGTCAGC CGAGATGGTG AAGAGTGCGT GGTGCGCCTG
GCACGCGGCG AGGAAGTGCG CGCCACGGCG GTCAACGTCG GCGCCGTGGG CGAGGCGGTG
AGCCTGTCGA TCCGACCCGA GCGCATCCGC CTCAACGGCC ACAGCGAGGC CTGCCCGAAC
CGTTTCTCCG GGCGCATCGC CGAGTTCATC TACCTAGGCG ATCACGTGCG CATCCGCATG
GAGGTCTGCG GCAAGTCCGA TTTCTACGTC AAGCAACCCG TGGCCGAGCT CGATCCGCAG
CTGGCGGTTG GTGACCTGGT TCCGCTCGGC TGGTCTGTCG AGCATGTCCG CGCGCTCGAC
CCACTCCAAG CCGAGTGA
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| Protein sequence | MANDVLVSFR GVQKSYDGET LIVKDLNLDI RKGEFLTLLG PSGSGKTTSL MMLAGFETPT
AGEILLDGRS LNKLPPHKRD IGMVFQNYAL FPHMTVAENL AFPLSVRGMS RTDISERVKR
ALSMVQLDSF RNRYPGQLSG GQQQRVALAR ALVFEPQLVL MDEPLGALDK QLREHMQMEI
KHLHQRLGVT VVYVTHDQGE ALTMSDRVAV FHQGEIQQIA PPRDLYEAPH NTFVAQFIGE
NNRLAGELVS RDGEECVVRL ARGEEVRATA VNVGAVGEAV SLSIRPERIR LNGHSEACPN
RFSGRIAEFI YLGDHVRIRM EVCGKSDFYV KQPVAELDPQ LAVGDLVPLG WSVEHVRALD
PLQAE
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