| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3996 |
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| Symbol | |
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| ID | 5110219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4368492 |
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| End bp | 4369661 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640505259 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001189475 |
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| Protein GI | 146309010 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.243095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.464149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTTAA CCGATGTGAA GATCCGCCAG GCCAAGCCTG GACCGTCGCC AATCAAGATG
GCCGATGGCG CTGGCTTGCA CCTAGAGGTC AGGCCGAACG GCTCCAAGCT GTGGCGCTAC
CGCTATCGGC TGGACGGTAA AGAGAACACC TTCGCCATCG GTGCCTACCC TGACGTTTCC
CTTGCTGATG CACGTGCTGA GCGCGATGTC GCGCGCGAGC ACGTGCGCGC AGGCCGGCAC
CCTTCTCACG TACGGCAGAC TGAGAAGGCC ACCCAGCTCG CTGAGAATCG CAACACCTTC
AAGGTCGTAG CTGAAGAGTG GATCGAGGAC CGCCTGGGCC AGAGGTCACA GACGTATCGT
GATCAGTGCC GGCGAGCATT CGTAAATGAC GTGTATCCGG CTATCGGTCG CATGCCCATG
CGTGAGATTA CTGCCGCCCA GGTGCTGGCG ATTCTGCGCA AGATGGACGG CCGTGGCGCA
ACCACGCTCG CCCTGCAGGT TCGGCAGTGG ATCTCGGCGG TGTTTCGGTT TGGGGTAGCA
ACGCTGCGTG CCGACGCTGA TCCTGCTGCC GCTCTCAAGG GAGCGATCCA GCGCAAGGCG
ATCAACCATA GCCAGCCGAT GTCGCGTGAG CAGTTGGGGG AATACCTGGC GGCCGTTGAC
CGCTACAAGG GGCACCGAGG CACGGTGATC GCGCTCAAGC TGCTGCCGAT GCTGTTTACC
CGTACCGGTG AGCTGAGATG TGCCAGGTGG CCGGAATTCG ATCTGGACGG GGCGATGTGG
GAAATTCCGG CCGAGCGTAT GAAGATGCGG CGCAAGCATC TGGTGCCCTT GCCCCATCAG
GCTGTCGAGC TGCTTCGAGA GCTGCGCAAG ATCACTGCCG GCGAGCTGCT GTTCCCAGGG
CTGCGTGATC CTGCCAGGCC GATCAGCCCC ACCACCCTCA ACCGAGCGCT TGAGTACCTG
GATATGAGGG GGTGGCATTG CCATGACTTC CGCGCGACAG CTTCAACGCA CCTTTATGAG
ATGGGGCGGT GGCGCTCAGA GGTGATCGAG CTGCAGCTGG CTCACGTGGA GCGCAACAAG
GTGCGGGCTG CCTACAACCA CGCTCAGTAT CTAGCGGAGC GGCGAGAGAT GATGCAGGCT
TGGGCGGATT CAATCTTCGG GGAGGGGTGA
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| Protein sequence | MPLTDVKIRQ AKPGPSPIKM ADGAGLHLEV RPNGSKLWRY RYRLDGKENT FAIGAYPDVS
LADARAERDV AREHVRAGRH PSHVRQTEKA TQLAENRNTF KVVAEEWIED RLGQRSQTYR
DQCRRAFVND VYPAIGRMPM REITAAQVLA ILRKMDGRGA TTLALQVRQW ISAVFRFGVA
TLRADADPAA ALKGAIQRKA INHSQPMSRE QLGEYLAAVD RYKGHRGTVI ALKLLPMLFT
RTGELRCARW PEFDLDGAMW EIPAERMKMR RKHLVPLPHQ AVELLRELRK ITAGELLFPG
LRDPARPISP TTLNRALEYL DMRGWHCHDF RATASTHLYE MGRWRSEVIE LQLAHVERNK
VRAAYNHAQY LAERREMMQA WADSIFGEG
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