| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3991 |
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| Symbol | |
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| ID | 5110214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4365415 |
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| End bp | 4365960 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640505254 |
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| Product | hypothetical protein |
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| Protein accession | YP_001189470 |
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| Protein GI | 146309005 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1896] Predicted hydrolases of HD superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.554313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.21218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCTGGA TCATCACCCG CACCGGCAAG CGCTTCGACC TCCTCGAACC GGCCGCCCAC
ATGGTCGACC CGACCGACAT CGCCCACGCG CTCAGCATGC AGTGCCGCTT CAACGGCCAC
GTGAAGTCCT TCTACAGCGT CGCCCAGCAC TGCCTCGTCG TCGCCGAGCT GGTGCCGGTG
CAGTACCAGC TGGAAGCCCT GCTGCACGAC GCCACCGAGG CTTATGTGGG CGATCTGGTG
AGCCCGCTGA AGCAGGCCCT GCCCGAGTAC CGCCAGATCG AAATGCGCGT CTGGCACGCC
ATCTGCCACC GCTTCGACAT CGAGCCCGTG CTGCCGCCCT GCGTGCATGA CGGCGACCTG
ATCGCCCTCG CCACCGAAAA GCGCGACCTG ATGCCGGCGC ACGCGGACGC ATGGCCTTGC
CTGGTCGGCA CCCACCCCGC GCAGTTCCGC ATCAAGCCCA TGACCCAGGC CGAGGCCGCA
CAGGCCTACT TCAACCGCCT GATGGAACTG CTGGCCACCA CCCACCGCGC GAGGGCTGCC
GCATGA
|
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| Protein sequence | MSWIITRTGK RFDLLEPAAH MVDPTDIAHA LSMQCRFNGH VKSFYSVAQH CLVVAELVPV
QYQLEALLHD ATEAYVGDLV SPLKQALPEY RQIEMRVWHA ICHRFDIEPV LPPCVHDGDL
IALATEKRDL MPAHADAWPC LVGTHPAQFR IKPMTQAEAA QAYFNRLMEL LATTHRARAA
A
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