Gene Pmen_3969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3969 
Symbol 
ID5110192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4349128 
End bp4349658 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content66% 
IMG OID640505232 
Producthypothetical protein 
Protein accessionYP_001189448 
Protein GI146308983 
COG category 
COG ID 
TIGRFAM ID[TIGR02215] phage conserved hypothetical protein, phiE125 gp8 family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.283816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGA CCCTCATCAC GCCGCCTGCT GCCGAGCCCA TCACCCTGGC CCAGGCCAAG 
GTGCAGTGCA AGGTGCGGCA CGACCAAGCG GATGCAAAGC TCACGCAGCA CATTCGCACG
GCCCGTGAGC TGGTCGAGAA GCGCACCGGG CGTGCGCTGA TCAACCAGGG CTGGCGGCAG
GTTGAGGATT GCGCGCCCAG CGTACTGCGC CTGTGGCGCT GGCCAGTGGT CAGCGTGCAG
CGCGTGTTGG TGGATGGCGT AGAGCAGGAT GCTGAAGCCT ACACCGTCGA GCTGGGCGAC
AACGCCCTGG TATGCCCGGT TGCGCCAGGG TGGCGCGGCC GGCGCGTACA GGTGGAGTAC
ACCGCCGGCT ACGGTGCCGA TGGCTCGGCA GTACCCGGGC CGGTGATGGA TTGGATGCTG
ATGCAGATTT CCAACCTCTA CGAGAACAGC GGCTCGGTGG TGGTGGGAGC CTCGGTGGCA
TCCATCGGCT TCGTTGACCG CCTGCTTGAT CACTATGAAA TCCCGAGGTA G
 
Protein sequence
MRLTLITPPA AEPITLAQAK VQCKVRHDQA DAKLTQHIRT ARELVEKRTG RALINQGWRQ 
VEDCAPSVLR LWRWPVVSVQ RVLVDGVEQD AEAYTVELGD NALVCPVAPG WRGRRVQVEY
TAGYGADGSA VPGPVMDWML MQISNLYENS GSVVVGASVA SIGFVDRLLD HYEIPR