Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3969 |
Symbol | |
ID | 5110192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4349128 |
End bp | 4349658 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640505232 |
Product | hypothetical protein |
Protein accession | YP_001189448 |
Protein GI | 146308983 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02215] phage conserved hypothetical protein, phiE125 gp8 family |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.283816 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGA CCCTCATCAC GCCGCCTGCT GCCGAGCCCA TCACCCTGGC CCAGGCCAAG GTGCAGTGCA AGGTGCGGCA CGACCAAGCG GATGCAAAGC TCACGCAGCA CATTCGCACG GCCCGTGAGC TGGTCGAGAA GCGCACCGGG CGTGCGCTGA TCAACCAGGG CTGGCGGCAG GTTGAGGATT GCGCGCCCAG CGTACTGCGC CTGTGGCGCT GGCCAGTGGT CAGCGTGCAG CGCGTGTTGG TGGATGGCGT AGAGCAGGAT GCTGAAGCCT ACACCGTCGA GCTGGGCGAC AACGCCCTGG TATGCCCGGT TGCGCCAGGG TGGCGCGGCC GGCGCGTACA GGTGGAGTAC ACCGCCGGCT ACGGTGCCGA TGGCTCGGCA GTACCCGGGC CGGTGATGGA TTGGATGCTG ATGCAGATTT CCAACCTCTA CGAGAACAGC GGCTCGGTGG TGGTGGGAGC CTCGGTGGCA TCCATCGGCT TCGTTGACCG CCTGCTTGAT CACTATGAAA TCCCGAGGTA G
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Protein sequence | MRLTLITPPA AEPITLAQAK VQCKVRHDQA DAKLTQHIRT ARELVEKRTG RALINQGWRQ VEDCAPSVLR LWRWPVVSVQ RVLVDGVEQD AEAYTVELGD NALVCPVAPG WRGRRVQVEY TAGYGADGSA VPGPVMDWML MQISNLYENS GSVVVGASVA SIGFVDRLLD HYEIPR
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