| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3935 |
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| Symbol | |
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| ID | 5106469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4320992 |
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| End bp | 4321954 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505198 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_001189414 |
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| Protein GI | 146308949 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTGC CCGCCCTGCT CGAACAACGC CTGCGCCTGC CGCTGGTGGC TGCGCCGATG
TTCCTGGTGT CCAATCCGGC ACTGGTCAGT GCCTGCTGCA ACAGCGGTAT CGTTGGCAGC
TTTCCGGCGC TGAACCAGCG CGAGAGCGCC GGCTTCGCCG CCTGGCTCGA CGAGATCGAA
GCCAGTCTTG CGGCTGACGC CGCGCCCTTC GCCGTCAACC TGATCGTGCA TAACAGCAAC
CCTCGGCTGC AGGCGGATCT GGCCATCTGC GTCGAACGCC GCGTGCCCAT CGTCATCACC
AGCCTGGGCG CGGTGAAGGA AGTGGTCGAT GCCGTGCACA GCTACGGCGG CCTGGTTTTC
CATGACGTGA CCACCCGCCG CCATGGCGAA AAGGCCGCCG AGGCCGGTGT GGACGGTCTG
ATTGCCGTGG CAGCCGGCGC TGGCGGCCAC GCCGGCACGT GGAGCCCCTT CGCCCTGCTG
GCGGAGATTC GGCAGTTCTT CGACAAGACC GTGCTGCTGT CCGGCTGCCT CAATCACGGC
CACGAAATTC TCGCTGCCCA GCTGCTCGGC GCCGATCTGG CCTATATGGG CACACGCTTT
ATCGCTACCC AGGAAAACAA TGCCTCCGAG GATTACAAGC GCATGATTCT CGGTGCTCAG
GCAGCCGATA TCATCCACAC CCCGGCGGTA TCGGGCGTGC CGGCCAGTTT CATGCGCCAG
AGCCTGGAGC AGGCCGGCTA TGACCTGAAG CAGCTGCAGA ACAAGGCCGA CATCAATTAC
GGGGAAAAAC TCAAACCCAT GGATGAGGAA GCCAAGGCCT GGAAAACCGT CTGGTCGGCC
GGCCAGGGGG TTGGCGGCAT CGACGACCTG CCCTCGGTGC AGGAACTGGT AGCGCGACTC
GACCGCGAAT ACCGGGCCGC CCTGGTGCGC AGCCAACAGC TGGGGCAACG CTGGCCGCGA
TGA
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| Protein sequence | MSLPALLEQR LRLPLVAAPM FLVSNPALVS ACCNSGIVGS FPALNQRESA GFAAWLDEIE
ASLAADAAPF AVNLIVHNSN PRLQADLAIC VERRVPIVIT SLGAVKEVVD AVHSYGGLVF
HDVTTRRHGE KAAEAGVDGL IAVAAGAGGH AGTWSPFALL AEIRQFFDKT VLLSGCLNHG
HEILAAQLLG ADLAYMGTRF IATQENNASE DYKRMILGAQ AADIIHTPAV SGVPASFMRQ
SLEQAGYDLK QLQNKADINY GEKLKPMDEE AKAWKTVWSA GQGVGGIDDL PSVQELVARL
DREYRAALVR SQQLGQRWPR
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