Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3932 |
Symbol | |
ID | 5106466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4318660 |
End bp | 4319385 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640505195 |
Product | hypothetical protein |
Protein accession | YP_001189411 |
Protein GI | 146308946 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.347315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCCGG CCTGGGAGGT CCGCCTCAGC GATCCGCGTC GAGAGCGTCG GCGCCGCTGG ATACTGGTCT TGCTGCTGCT GGCCATTCCC GGGGCGTTTC TGCTGGGCTT CTTCGGTGCC CAGCAGCACG GCCAGCAGGT GGAAGATCAA ACCCATGCTC TGCTTGCCAG GCTGGCCGAG CAGGAGCAGG AACTGGAGTT GCTGCGTCAG CGTCTGGCCG TGGTCGGCAG CAGTGACAAG GTCAGCCAGC AGGCCATCGA ACAGAATCGC CGCACCATCA AGCTGCTCGA GGAGCAGATC TTCAAGCAAC AACAGGATCT GGCCTTCTAC AAGGGCGTGC TGGCGCCTGC CAGTCGTCGC GAAGGCATCC GTATCCGCGC CTTTGAGCTG CAAGCCACGG ACTCGCCCGG CCATTTCCGC TACAAAGTGC TGATGAGTCG TGTGGGGAGC AGTGACGAGC CGCTAAAGGG CAAGTTGCGG ATCACCGTCG AAGGACAACA GGGAGGCAAG GACGTCAGTC TGCACCTGTC GCAGTTGTCC AGTGAGGTGA GCGAGGCCAG CATCCCGTTC TCCTTCAAGC ATTTTCAGTC ATTTCCCGAG GCCGGACGCT TCGGCGAGAT GCAACTGCCT GATGGCTTCG AGCCGCGTCA GGTAAAAGTC CGCGCGGAAG TCGAAGGTGA CAAGCCGCTG GATCGTACGT TCGATTGGAT AAACCAGGAG CAATAG
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Protein sequence | MTPAWEVRLS DPRRERRRRW ILVLLLLAIP GAFLLGFFGA QQHGQQVEDQ THALLARLAE QEQELELLRQ RLAVVGSSDK VSQQAIEQNR RTIKLLEEQI FKQQQDLAFY KGVLAPASRR EGIRIRAFEL QATDSPGHFR YKVLMSRVGS SDEPLKGKLR ITVEGQQGGK DVSLHLSQLS SEVSEASIPF SFKHFQSFPE AGRFGEMQLP DGFEPRQVKV RAEVEGDKPL DRTFDWINQE Q
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