Gene Pmen_3932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3932 
Symbol 
ID5106466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4318660 
End bp4319385 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content61% 
IMG OID640505195 
Producthypothetical protein 
Protein accessionYP_001189411 
Protein GI146308946 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.347315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCCGG CCTGGGAGGT CCGCCTCAGC GATCCGCGTC GAGAGCGTCG GCGCCGCTGG 
ATACTGGTCT TGCTGCTGCT GGCCATTCCC GGGGCGTTTC TGCTGGGCTT CTTCGGTGCC
CAGCAGCACG GCCAGCAGGT GGAAGATCAA ACCCATGCTC TGCTTGCCAG GCTGGCCGAG
CAGGAGCAGG AACTGGAGTT GCTGCGTCAG CGTCTGGCCG TGGTCGGCAG CAGTGACAAG
GTCAGCCAGC AGGCCATCGA ACAGAATCGC CGCACCATCA AGCTGCTCGA GGAGCAGATC
TTCAAGCAAC AACAGGATCT GGCCTTCTAC AAGGGCGTGC TGGCGCCTGC CAGTCGTCGC
GAAGGCATCC GTATCCGCGC CTTTGAGCTG CAAGCCACGG ACTCGCCCGG CCATTTCCGC
TACAAAGTGC TGATGAGTCG TGTGGGGAGC AGTGACGAGC CGCTAAAGGG CAAGTTGCGG
ATCACCGTCG AAGGACAACA GGGAGGCAAG GACGTCAGTC TGCACCTGTC GCAGTTGTCC
AGTGAGGTGA GCGAGGCCAG CATCCCGTTC TCCTTCAAGC ATTTTCAGTC ATTTCCCGAG
GCCGGACGCT TCGGCGAGAT GCAACTGCCT GATGGCTTCG AGCCGCGTCA GGTAAAAGTC
CGCGCGGAAG TCGAAGGTGA CAAGCCGCTG GATCGTACGT TCGATTGGAT AAACCAGGAG
CAATAG
 
Protein sequence
MTPAWEVRLS DPRRERRRRW ILVLLLLAIP GAFLLGFFGA QQHGQQVEDQ THALLARLAE 
QEQELELLRQ RLAVVGSSDK VSQQAIEQNR RTIKLLEEQI FKQQQDLAFY KGVLAPASRR
EGIRIRAFEL QATDSPGHFR YKVLMSRVGS SDEPLKGKLR ITVEGQQGGK DVSLHLSQLS
SEVSEASIPF SFKHFQSFPE AGRFGEMQLP DGFEPRQVKV RAEVEGDKPL DRTFDWINQE
Q