Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3872 |
Symbol | |
ID | 5106406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4258692 |
End bp | 4259465 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640505126 |
Product | hypothetical protein |
Protein accession | YP_001189351 |
Protein GI | 146308886 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGCT TCCCCCTCCG CTCCCTGGCC GCCGCCCTGA TGCTGGCCAG CGGTTCGCTG GCTGCCGCAC CGCTCGATGC GGCGCTGGAC GAAAGCCAGC GTCTGGCCGC CGAGGCCAAA GCCTCTCAGG GCCGTGTCGA GCAGCTGGAC GACGCCAGCC GCGAGATGCT CAACGAGTAC CGTAACGCCT TGCAGCAGGC CGAGGCTTTG AAAGGTTATA ACAGTCAACT TCGTGACCTG GTCGCAGCCC AGCGTCAGGA GTTGGCCAGC TACCAGAAGC AGCTGGACGG TATCGAGCGC ACCCAGGAAG CGGTGAGCCC GCAGATGGTC AAGATGGTCG AGGTGCTCGG CCAGTTCATC GCCGCCGACC TGCCGTTCCT GCCCGAGGAG CGCGAGGACC GTCTGGCCCA GCTGCAGGAC CTGCTGCCGC GCGCCGACGT CAGTCTGGCC GACAAGTACC GCCGCATCCT CGAGGCCTAT CAGATCGAGA GCGATTACGG CCGTACGCTC GAAGCCTGGC GCGGCGAGCT GAACCAGGCC GAGGGCGGCT CGCGCAGTGT CGAGTTCCTG CGCCTGGGCC GTAGCATGCT CTATTACCAG ACCCTCGATG CCCATGAGAG CGGCTGGTGG AACCCGCAGG CCCAGGCCTG GCAGGTGCTC GACGGCAGCG CGCGGCGCCC GCTGACCCAG GCCATCGCCA TCGCCCGTCA GCAGCAGGCG CCCGCCGTGC TGTCCCTGCC GATCAAGACC CTGGCCGAGG AGGCCGCACA ATGA
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Protein sequence | MNRFPLRSLA AALMLASGSL AAAPLDAALD ESQRLAAEAK ASQGRVEQLD DASREMLNEY RNALQQAEAL KGYNSQLRDL VAAQRQELAS YQKQLDGIER TQEAVSPQMV KMVEVLGQFI AADLPFLPEE REDRLAQLQD LLPRADVSLA DKYRRILEAY QIESDYGRTL EAWRGELNQA EGGSRSVEFL RLGRSMLYYQ TLDAHESGWW NPQAQAWQVL DGSARRPLTQ AIAIARQQQA PAVLSLPIKT LAEEAAQ
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