Gene Pmen_3872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3872 
Symbol 
ID5106406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4258692 
End bp4259465 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content68% 
IMG OID640505126 
Producthypothetical protein 
Protein accessionYP_001189351 
Protein GI146308886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCT TCCCCCTCCG CTCCCTGGCC GCCGCCCTGA TGCTGGCCAG CGGTTCGCTG 
GCTGCCGCAC CGCTCGATGC GGCGCTGGAC GAAAGCCAGC GTCTGGCCGC CGAGGCCAAA
GCCTCTCAGG GCCGTGTCGA GCAGCTGGAC GACGCCAGCC GCGAGATGCT CAACGAGTAC
CGTAACGCCT TGCAGCAGGC CGAGGCTTTG AAAGGTTATA ACAGTCAACT TCGTGACCTG
GTCGCAGCCC AGCGTCAGGA GTTGGCCAGC TACCAGAAGC AGCTGGACGG TATCGAGCGC
ACCCAGGAAG CGGTGAGCCC GCAGATGGTC AAGATGGTCG AGGTGCTCGG CCAGTTCATC
GCCGCCGACC TGCCGTTCCT GCCCGAGGAG CGCGAGGACC GTCTGGCCCA GCTGCAGGAC
CTGCTGCCGC GCGCCGACGT CAGTCTGGCC GACAAGTACC GCCGCATCCT CGAGGCCTAT
CAGATCGAGA GCGATTACGG CCGTACGCTC GAAGCCTGGC GCGGCGAGCT GAACCAGGCC
GAGGGCGGCT CGCGCAGTGT CGAGTTCCTG CGCCTGGGCC GTAGCATGCT CTATTACCAG
ACCCTCGATG CCCATGAGAG CGGCTGGTGG AACCCGCAGG CCCAGGCCTG GCAGGTGCTC
GACGGCAGCG CGCGGCGCCC GCTGACCCAG GCCATCGCCA TCGCCCGTCA GCAGCAGGCG
CCCGCCGTGC TGTCCCTGCC GATCAAGACC CTGGCCGAGG AGGCCGCACA ATGA
 
Protein sequence
MNRFPLRSLA AALMLASGSL AAAPLDAALD ESQRLAAEAK ASQGRVEQLD DASREMLNEY 
RNALQQAEAL KGYNSQLRDL VAAQRQELAS YQKQLDGIER TQEAVSPQMV KMVEVLGQFI
AADLPFLPEE REDRLAQLQD LLPRADVSLA DKYRRILEAY QIESDYGRTL EAWRGELNQA
EGGSRSVEFL RLGRSMLYYQ TLDAHESGWW NPQAQAWQVL DGSARRPLTQ AIAIARQQQA
PAVLSLPIKT LAEEAAQ