| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3868 |
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| Symbol | |
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| ID | 5106402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4255700 |
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| End bp | 4256383 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640505122 |
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| Product | TonB family protein |
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| Protein accession | YP_001189347 |
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| Protein GI | 146308882 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGC CGCTGTCTTT TCTCGGCGCC TGCCTGATGG CCCTGGGGCT GTTCGCCCTG
ATGCTGTACA TGGTCGCGCC GCCGAGCGCC AAGGTCAGCC AGGACCCGGT CAGCGTGGCC
AACTTCGTGC GCATGGACGG CAACACCAGC GAGACCGCCA GCCGTACCCG TCAGCAGGCA
CCGCAGCCGC CGCAGCCGCA AACACCGCAG CCGCCCACGC CGCCGACGCC GCAAACGGCC
ACGCCGAATG CCAACCTGCC GGCGCTGGAC ATCCAGCTGC CCAGCCTGGC CAGCGGTATC
GCCGTCAACA GCGCGCCGTC GCCGAGCCTG TCCGGCCTGG CGCCGGGCGC GCCAGCGCCG
ACGCCGCCGA GCGAGGCCGC CGAGTCCGGT GGGCAGATGG GCGGCATGGA GAGCGAGGTC
ATGCCGCTCA ACGACGTGCG TCCGGAATAC CCGCGCTATG CGCTGCAACG AGGCATCGAA
GGTTTCGTCA AACTGGCGTT CACCATCAAC CGCTCCGGCA ATGTGGAGAA CATCCGCGTG
CTGGAGGCCA ATCCGCGCAA TGTGTTCGAG CGCGAAGCGC GCCGCGCCGC CGCTCGCTGG
CGCTTCGCGC CGCGTACCGA GGGTGGCCTG GCAGTGGACC GCGAAGCGGT GAAAACCCTC
TACTTCCGTC TGGAAAGGAG CTGA
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| Protein sequence | MRLPLSFLGA CLMALGLFAL MLYMVAPPSA KVSQDPVSVA NFVRMDGNTS ETASRTRQQA
PQPPQPQTPQ PPTPPTPQTA TPNANLPALD IQLPSLASGI AVNSAPSPSL SGLAPGAPAP
TPPSEAAESG GQMGGMESEV MPLNDVRPEY PRYALQRGIE GFVKLAFTIN RSGNVENIRV
LEANPRNVFE REARRAAARW RFAPRTEGGL AVDREAVKTL YFRLERS
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