Gene Pmen_3867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3867 
Symbol 
ID5106401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4254600 
End bp4255697 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content69% 
IMG OID640505121 
Producthypothetical protein 
Protein accessionYP_001189346 
Protein GI146308881 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.492379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCGTT GGTTGTTGCT CGTGATGCTC AGTGCTGGGG CCGTGCCTGG CATGGCCCAG 
CAGACCGTCG ACCCGACCGT GTTCCGCGCG CTGAACGCGG CGCAGGCCGC GCAGCAGAAG
GGTGACCACG CCGCCGCACG GCGCGCGCTG GAGGGCATCC AGGCCAAGAG TGGCAGTCTC
GAAGAGGCGC TGATCTGGCG CAGCCAGGCC TATGTGGCCT GGTCGGCCGG CAACAACGAA
CAGGCCATCG AGTGGCTGGA CAAGGCCGTG CGCAGCGGCA AGCTCGACGA ACAGATGCTC
GCCGGCGAAC GCCTCAACCT GGCCAAGCTC AATCTCGGCG AGCGCCGTTT CGCCAAGGTC
GTCGAGCTGC TGGGGCCCGA GCAGGGCACG GCCTCCGAAG AGGTGCTGCA GATGCTGGTG
CAGGCCTACC AGGGCCTGAA CCAGCCGGCC AAGGCATTGC CACTGGCCGA GCGCTACGTG
CAGGCCAACC CCAAGGCCGC CGATATCTGG CTGCAGTTCC TGGTGGGCGC CAACGCCGAC
CTCAAGCGCT ATGCCCAGGC CGAGCGCTGG CAGCGTCAGC TGCTGGCGCG TCAGCCGAAC
GATGCCAAGG GCTGGCGCCA ACTGGCCGGT CTGCAGCAGA TGGCCGGCAG CAACGACAAG
GCGCTGGCGA CCCTGCGTGC GGCGCACAGC AAGGGCCTGC GCTTCAGCGA AGCGGAGCTG
GACAACCTGG TGCTGCTCGC TGGCGCCGCC GATCAGCCCT GGCAGGGCGC CAAGCTGCTG
GCCGGCATGC TCGACAGCGG CCTGCTGGCC AACACCGCTG CCCGTCAGGA GCGCCTGGGC
CTGTTCTGGT GGCAGGCGCG TGATCGCGCC GCGGCGGTGC GCGTGCTGCG TCCGCTGGCC
GAACGCAGCG GCAACGGCAA GCACTGGCTG TATGTCGCCC AGCTGGAGCT GGAACAGTCT
CGCTGGCAGG CCGGGCTGGA CGCGCTGGCG CGTGCCGAAC GCGGTGGTGC CGAGCGCGCC
AAGGTGCGTT CATGGCGGCA GTGGGCGGAA AGCGAACTGC GTTTCGAGCA GGAAAATCGG
GTCGCCAGTC GCAGTTGA
 
Protein sequence
MYRWLLLVML SAGAVPGMAQ QTVDPTVFRA LNAAQAAQQK GDHAAARRAL EGIQAKSGSL 
EEALIWRSQA YVAWSAGNNE QAIEWLDKAV RSGKLDEQML AGERLNLAKL NLGERRFAKV
VELLGPEQGT ASEEVLQMLV QAYQGLNQPA KALPLAERYV QANPKAADIW LQFLVGANAD
LKRYAQAERW QRQLLARQPN DAKGWRQLAG LQQMAGSNDK ALATLRAAHS KGLRFSEAEL
DNLVLLAGAA DQPWQGAKLL AGMLDSGLLA NTAARQERLG LFWWQARDRA AAVRVLRPLA
ERSGNGKHWL YVAQLELEQS RWQAGLDALA RAERGGAERA KVRSWRQWAE SELRFEQENR
VASRS