| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3864 |
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| Symbol | |
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| ID | 5106398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4251812 |
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| End bp | 4252519 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640505118 |
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| Product | ABC transporter related |
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| Protein accession | YP_001189343 |
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| Protein GI | 146308878 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC CTCTGATCGA ACTGGCCGAC CTCGGCTTCG CCTGGCCCGG CCAGGCGCAA
TTGCTGGACA TCCCCAGCTT CACCCTGGCA CGCGGCGAGA CCCTGTTTCT CAAGGGCCCC
AGCGGCAGCG GCAAGACCAC CCTGCTCGGC CTGCTGGGCG GCGTGCAAAA GGCCCAGCGC
GGGCACATCC GCCTGCTCGG CCAGGATCTC GGCCAGCTCT CGGCCGGCGC CCGCGACCGC
TTTCGTGTCG ATCACACCGG CTACATCTTC CAGCAGTTCA ACCTGCTGCC CTTTCTCTCG
GTGCGCGAGA ACGTCGAACT GCCCTGCCGC TTCTCACGCT CGCGTGCAGA ACGCGCGCGC
CAGCGCCATG GCAGCATCGA TGCTGCAGCC GCCGCGCTGC TCGACCATCT GGGGCTGCGC
GCCGACCTGC TCGGCCGCCG CGCCGACGAG TTGTCCATCG GCCAGCAGCA GCGCGTTGCT
GCCGCGCGCG CATTGATCGG CCAGCCGGAA CTGGTGATCG CCGACGAACC CACCTCGGCG
CTGGACTTCG ACGCCCGCGA GGCCTTCCTC CAGCTGCTCT TCGCCGAATG CCGCGCGGCC
GGCGCCAGCC TGCTGTTCGT CAGCCACGAC CAGAGCCTGG CCGCGCTGTT CGACCGCAGC
CTGTCGCTGG CCGAACTCAA CCGCGCCACG CGCCCCCAGG AGGCCTGA
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| Protein sequence | MTEPLIELAD LGFAWPGQAQ LLDIPSFTLA RGETLFLKGP SGSGKTTLLG LLGGVQKAQR
GHIRLLGQDL GQLSAGARDR FRVDHTGYIF QQFNLLPFLS VRENVELPCR FSRSRAERAR
QRHGSIDAAA AALLDHLGLR ADLLGRRADE LSIGQQQRVA AARALIGQPE LVIADEPTSA
LDFDAREAFL QLLFAECRAA GASLLFVSHD QSLAALFDRS LSLAELNRAT RPQEA
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