| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3835 |
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| Symbol | |
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| ID | 5106065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4222584 |
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| End bp | 4225076 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640505089 |
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| Product | ABC transporter related |
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| Protein accession | YP_001189314 |
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| Protein GI | 146308849 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGA GCAACCGCTA CCTGGCGCCA AGCGGCCTGG CCGCGCTGGC GCTGCTGGGC
AGCAGCCTGG CCTTCGTGCT GGACAGCTAT TCGCTGCTGG TCTTCACCTT CTGCGCGCTG
GCGGCCGTGG TCGGTGTCGG CCTGAACATC CTCATGGGCC TGTCCGGGCA GATTTCCTTC
GGCCATATCG CCTTCTACGC CATCGGCGCC TACATCTCCG CGCTGCTGCT GATGGCCGGC
TTGCCGCTGG GCCTGGCGCT GATCATCGCC GGCCTCGGCA GCGGCCTGGT CGGTGCCCTG
CTGGCATTGC CGGCGCTGCG CGTAACCGGG CCCTACCTGG CGATGGTGAC CATCGCCTTC
GCCTTCATGG TGCACCACGG GCTGATCGAG TGGCAGTCGC TGACCGGCGG TGCCAACGGC
CTGATCGGCA TTCCCATGCC CGCGTTTGGC GGGCTGGACG GTAATGTCGG CCTGGCCCTG
CTGGCCACCG CGTTGATGGT GGCGGCGCTG GCCTTCTACC GGCGCCTGCA GGGCAGCGGC
TGGGGGCGGG CGATGCGCGC CGTGAAGTCG ACGGAAATCG CCGCGCGTTC GCTGGGCTTC
AACCCGATGC AGACCAAAAC CCTGGCCTTC GCCCTGTCGG CCACTCTGAC CGGTATGGCC
GGCGGCCTGG TGGCGCCGCT GATGATGTTC ATCAGCCCGG ACTCCTTCCC CTTCTCGCAG
TCGATCCTGT TCGTCCTGGC GGTGATAGTC GGCGGCAGCG GCACGCTGTT CGGCCCGGTG
CTCGGGGCGC TGCTGATCGT GCTGCTGCCG GAGATGCTCT CGGGCCTGGC CGAATACCGC
CTGCTGATCT TCTCCATGCT CCTGCTCGCG GTGCTCTGGC TGGCGCCGCG CGGTGTGCTC
GGCGCTTTGC AGCAGCGCTG GTGGCTGGCG CCGCCGGCCT ACGCGCCGAA GAGTGCCAAC
CGTCATCTGC TGGCGCGCTG GTTCGAGCGC AGCGGCGGCG AAGCGCAAGG CTTGCAGGTG
CGCGATGTCG GCATCCGCTT CGGCGGCGTG CAGGCGGCCA GCGCGATCAG CTTCAGCGCC
GAGCAGGGCA GCATCACCTC GGTGATCGGC CCCAATGGCG CCGGCAAGAC CACTCTGCTC
AATCTGATCA GCGGCTTCTA CTCCCCCGAT TCCGGGCAGA TCGAACTGGA GCAGCAACTG
GCTGGCCTGC CAGCCTGGAA GATCGCCCGC GCCGGCATCG CCCGTACCTA CCAGACCACC
CAGTTGTTCG GCGAGATGAG CGTGCTGGAG AACCTGCTGG CGGCCATGCA GCAGGGCCAG
CTCGGCCTGC CGCTGGCGCG CCCGCCGGCC GAGCAGGAAG AGCTGGCGCT GAACCTGCTG
GCGCTGGTGG GCTATCGCGG CTCGGTGACC TGCGCCGCGG ACGATCTGCC GCACGTCGAC
CGGCGCCTGG TGGAAATCGC CCGCGCCCTG GCCAGTCGGC CGCGGGTGTT GCTGCTCGAC
GAGCCGGCCG CCGGCCTTAG CCGTAGCGAC ACCGACCGCC TGGCCGGGCT GTTCAAGACC
CTGGCCGGCT TCGGCATCGC GGTGATCCTG GTGGAGCACG ACATGCCGCT GGTGATGGCG
GTGTCGCAGC GCATCCTGGT GCTCGACGCC GGCCGCCCGA TCGCCTGGGG CACTCCGGAC
GAGGTGCGAC AGGACCCGCG AGTGGTCGCC GCCTACCTGG GCAGCACCGA CTACCAGGCG
CAGCCGCGTG ACGCGGCCTG GGACGGCAGC CGCGACGCCA TCCTGTTCGT CAAGGACCTG
GTGGTCGACT ACGGCGCCGC GCCGGTGGTG CAAGGGGTGG ATCTGCTGGT CAATCCCGGC
GAGCTGGTGG CGATTCTCGG CGCCAATGGC GCCGGCAAGT CGAGCATCCT GCAGTGCCTG
GCAGGGCTCA AACGGCCTTC TTCGGGCCTC GTGGTGCTGG ACGACGTCAA TATCGAGAAA
GCCGAGGCCA GCGCCATCGC CGCGCGCGGC CTGGCCCTGG TGCCGGAGGG GCGACAGTTG
TTCCCCCAGC TCAGCGTGCG CGACAACCTG CTGCTGGGCG CCTACACCCG TACCGACCAG
GTGGATGCCG AGGCCGAGAT CGAAGCCATC CTGCGCCGCT TCCCGCGCTT GCGCGAGCGC
CTGGACAGCC CGGCCGGGCT GCTTTCCGGT GGCGAGCAGC AGATGGTCGC GGTGGGCCGC
GGACTGATGG CCAAACCGCG CATCCTGCTG CTTGACGAGC CCTCGCTGGG CCTGGCGCCG
GCGATGATCG CCGAGCTCTA CGATGCCCTG GCGAGCCTGC GCGACGAAGG CGTGACCCTG
CTGCTGGTGG ACCAGATGGC CAACCTCGCA CTGCAGGTGG CCGACCGTGC CTACGTGCTG
GAGACCGGGC GCATCGTCAA ATCCGGCAGC GCTGCCGAGC TGCGCAACGA CCCCGAGCTG
GAAGCCGCCT ACCTGGGGGA GAGCGCCGCA TGA
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| Protein sequence | MNLSNRYLAP SGLAALALLG SSLAFVLDSY SLLVFTFCAL AAVVGVGLNI LMGLSGQISF
GHIAFYAIGA YISALLLMAG LPLGLALIIA GLGSGLVGAL LALPALRVTG PYLAMVTIAF
AFMVHHGLIE WQSLTGGANG LIGIPMPAFG GLDGNVGLAL LATALMVAAL AFYRRLQGSG
WGRAMRAVKS TEIAARSLGF NPMQTKTLAF ALSATLTGMA GGLVAPLMMF ISPDSFPFSQ
SILFVLAVIV GGSGTLFGPV LGALLIVLLP EMLSGLAEYR LLIFSMLLLA VLWLAPRGVL
GALQQRWWLA PPAYAPKSAN RHLLARWFER SGGEAQGLQV RDVGIRFGGV QAASAISFSA
EQGSITSVIG PNGAGKTTLL NLISGFYSPD SGQIELEQQL AGLPAWKIAR AGIARTYQTT
QLFGEMSVLE NLLAAMQQGQ LGLPLARPPA EQEELALNLL ALVGYRGSVT CAADDLPHVD
RRLVEIARAL ASRPRVLLLD EPAAGLSRSD TDRLAGLFKT LAGFGIAVIL VEHDMPLVMA
VSQRILVLDA GRPIAWGTPD EVRQDPRVVA AYLGSTDYQA QPRDAAWDGS RDAILFVKDL
VVDYGAAPVV QGVDLLVNPG ELVAILGANG AGKSSILQCL AGLKRPSSGL VVLDDVNIEK
AEASAIAARG LALVPEGRQL FPQLSVRDNL LLGAYTRTDQ VDAEAEIEAI LRRFPRLRER
LDSPAGLLSG GEQQMVAVGR GLMAKPRILL LDEPSLGLAP AMIAELYDAL ASLRDEGVTL
LLVDQMANLA LQVADRAYVL ETGRIVKSGS AAELRNDPEL EAAYLGESAA
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