| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3795 |
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| Symbol | |
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| ID | 5106026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4183212 |
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| End bp | 4184225 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505050 |
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| Product | rare lipoprotein A |
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| Protein accession | YP_001189275 |
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| Protein GI | 146308810 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0797] Lipoproteins |
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| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.443521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGT CCAAACTGCT GCCGCTGGCG GCCTGCGTCA CCGCGGCGCT GCTGCTGACC
AGCTGCTCTT CCAATCGTGC ACCGCAGCCG GTGGTGACGC CTGGTCAATC CAGCGGCATT
TCCGGGCCGG GCGATTTCAA CCGCCCGCAC AAGGATGGCG CGCCCTGGTG GGACGTGGAC
GTGTCGAAGA TTCCCGACGC CATCCCCATG CCGCACTACG GGCCGGTCAA GGCCAGCCCC
TACGTGGTGT TCGGCAAGCA GTACTACCCG ATTCAGGACG CCCGTCGCTA TCAGGCGGTG
GGGCCGGCTT CCTGGTACGG CACCAAGTTC CATGGTCAGG CCACCGCCAA CGGCGAGACC
TACGACCTGT ACGGCATGAC CGCGGCGCAC AAGACGCTGC CGCTGCCCAG CTACGTGCGG
GTGACCAACC TGGAGAACGG CAAGAGCGTG ATCCTGCGCG TCAACGACCG CGGACCGTTC
TATTCCGATC GCATCATCGA CCTGTCCTTC GCCGCAGCGA AGAAGCTCGA CTATGCCGAG
AAGGGCACCG CGCGGGTCAA GGTCGAGGGT ATCGACCCCC ACGAGTGGTG GGCGCAGCAG
GGCCGACCGG TACCGCTGGT GCTGGCCAAC AATCAGCCGG CCAAGGCCGC TGTGGCCAAA
CCTGCCGCGC AGCCGGTGGC ACAGGTCGTC GAGCAGTACT CGCCACCGCC GACGCAGCAC
GCGGCGGCCG TGGTGCCCGT GCAGATCGAC TCAAAAAAAA ACGATTCACT CGCAGCCTCT
GGCCTGTATC TCCAGGTGGG AGCCTTCGCC AATCCGGACG CTGCGGAGCT GCTCAAGGCC
AAGCTGACTC AGACCACCAG TGTCCCGGTG TTCATCAGCT CAGTGGTACG CGACCAGCAG
ATCCTGCACC GGGTCAGGTT GGGGCCGATC AGCAATCAGG GCGAGGCTGA GCAGCTGCAG
AGCAGCGTAC GCCTGGCCAA CCTGGGGCAG CCCACGCTGG TGCGTGCCGA CTGA
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| Protein sequence | MSASKLLPLA ACVTAALLLT SCSSNRAPQP VVTPGQSSGI SGPGDFNRPH KDGAPWWDVD
VSKIPDAIPM PHYGPVKASP YVVFGKQYYP IQDARRYQAV GPASWYGTKF HGQATANGET
YDLYGMTAAH KTLPLPSYVR VTNLENGKSV ILRVNDRGPF YSDRIIDLSF AAAKKLDYAE
KGTARVKVEG IDPHEWWAQQ GRPVPLVLAN NQPAKAAVAK PAAQPVAQVV EQYSPPPTQH
AAAVVPVQID SKKNDSLAAS GLYLQVGAFA NPDAAELLKA KLTQTTSVPV FISSVVRDQQ
ILHRVRLGPI SNQGEAEQLQ SSVRLANLGQ PTLVRAD
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