| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3781 |
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| Symbol | |
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| ID | 5106012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4169032 |
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| End bp | 4169487 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640505036 |
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| Product | putative metalloprotease |
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| Protein accession | YP_001189261 |
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| Protein GI | 146308796 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0319] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.170938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTGAGC TGGACCTGCA GCTGGCCAGC GATGGCCAGC ACCCGGACGA GGCGCAGCTG
CGCCGCTGGT GCGAACTGGC CCTGCGTCAG CGCACGGCCG ATTCCGAACT GACCATCCGC
CTGGTCGACG AGGAAGAAGG CCGCGAGCTG AACCGCACCT GGCGGCACAA GGACTACGCC
ACCAACGTCC TGTCCTTCCC TGCCGAAATT CCCGATGGAA TTCTCGATAT CCCGTTACTG
GGCGATCTGG TGATCTGCGT GCCGGTGCTC GAGCGCGAAG CGGCCGAGCA GGGCAAGACC
CTGGAGGCGC ACTGGGCGCA CCTAGTGATT CACGGCTGCC TGCACCTGCT GGGCTATGAC
CATATCGAGG AAGACGAAGC CCTCGAGATG GAAGAACTGG AACGACAATT GCTCGCCGAA
CTGGGTCACC CCGACCCATA TGCGGGCGAC GAATGA
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| Protein sequence | MLELDLQLAS DGQHPDEAQL RRWCELALRQ RTADSELTIR LVDEEEGREL NRTWRHKDYA
TNVLSFPAEI PDGILDIPLL GDLVICVPVL EREAAEQGKT LEAHWAHLVI HGCLHLLGYD
HIEEDEALEM EELERQLLAE LGHPDPYAGD E
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