Gene Pmen_3777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3777 
Symbol 
ID5105772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4165181 
End bp4165504 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content61% 
IMG OID640505032 
Producthypothetical protein 
Protein accessionYP_001189257 
Protein GI146308792 
COG category[S] Function unknown 
COG ID[COG4517] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.171808 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC GTGACCCCAT CTACAAGGTG ATTTTCCAGA ACCAGGGCCA GGTGTACGAG 
ATGTATGCCA AGCAGATCTA CCAGAGCGAT CTGTGGGGCT TTCTGGAGGT GGAGGAGTTC
GTCTTCGGCG AGCGCAACCA GCTGGTGGTC GACCCCAGCG AGGAGAAGCT CAAGGCGCAG
TTCGAGGGCG TGGTACGCAG CTTCGTGCCG ATGCACGCGA TCATCCGCAT CGACGAGGTG
GAGCGCCTGG GCACGGCGAA GATCAGCGAG GCCAAGGGCG GCGGCAACGT CATGCCGTTC
CCCATGCCGA TGCCGGACAA GTGA
 
Protein sequence
MSKRDPIYKV IFQNQGQVYE MYAKQIYQSD LWGFLEVEEF VFGERNQLVV DPSEEKLKAQ 
FEGVVRSFVP MHAIIRIDEV ERLGTAKISE AKGGGNVMPF PMPMPDK