| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3772 |
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| Symbol | |
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| ID | 5105767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4161086 |
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| End bp | 4161883 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640505027 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_001189252 |
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| Protein GI | 146308787 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0714273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGC CAAACTCCCG CCCCGTAGTG CTGTGCATGT CCGGTCACGA CCCCAGCGGT
GGTGCCGGCC TGCAGGCCGA TATCGAAGCC CTGCTGGCGC AGGGCTGTCA CGCCGCCCCG
ACGGTAACCG CGCTGACCGT GCAGGACACC GTCAACGTCT CCGACTTCCG CGTGCTCGAC
CGCGACTGGG TGCTGGCCCA GGCCCGCGCC GTGATCGCCG ACATGCCGGT GGCCGCCGTC
AAGCTGGGCA TGCTCGGCTC GGTGGAGATG GTCGAGACCG TGCTCGAGGT GATGAGCCAG
CTGCCGGGCG TACCGCTGGT CTGCGACCCG GTACTGCGCG CCGGCGGCGG CGGCTCGCTG
GGCAAGGACG ATGTCGGCTA TGCCATGCGC GAGCGCCTGT TCGCCGTGTC CACCATCGCC
ACGCCGAACC TGCCGGAAGC GCGCATCCTC GCCGAACTGC CGCAAGGCAG CGCCGACGAG
TGCGCCGAGA AGCTGCTGCC TTTTATAGAA CACCTGCTGA TCACCGGCGG CCACGGTGAC
GAAGCCGAAG TGCACAACCG CCTGTACTGC CGTGACGGCA GCCGCCACAC CTTCACCTGC
GCGCGCCTGC CCGGCAGTTA CCACGGCTCC GGCTGCACCC TGGCCAGCAC CCTGGCCGGT
CGCCTGGCCC TGGGCGAGGA ACTGGTCAGC GCCGTGAAAA GTGCCCTGGA CTACACCTGG
CGCACCCTGC GCGACGCCGA ACAACCCGGC CACGGCCAGT ACGTGCCGCG CCGTCTGCCG
CTGGACTTCG CCCAATGA
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| Protein sequence | MKTPNSRPVV LCMSGHDPSG GAGLQADIEA LLAQGCHAAP TVTALTVQDT VNVSDFRVLD
RDWVLAQARA VIADMPVAAV KLGMLGSVEM VETVLEVMSQ LPGVPLVCDP VLRAGGGGSL
GKDDVGYAMR ERLFAVSTIA TPNLPEARIL AELPQGSADE CAEKLLPFIE HLLITGGHGD
EAEVHNRLYC RDGSRHTFTC ARLPGSYHGS GCTLASTLAG RLALGEELVS AVKSALDYTW
RTLRDAEQPG HGQYVPRRLP LDFAQ
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