| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3771 |
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| Symbol | |
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| ID | 5105766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4159782 |
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| End bp | 4160942 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505026 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001189251 |
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| Protein GI | 146308786 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.16042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGC GTACCTGCCT GATCATGATG ACCGCCCTGG CGGTGATCAC CGACAACTTG
ATCATCCCCT TCTATCCGCA GTACTTCGCC GAGCGCTTCG ACAACCCGCC GGAGCAGCAC
GTCGGCCTGT ATCTGGCGGT GGTCAGCCTG GTGGTGATGG CGGTGTTCCC GCTCTGGGCG
CGTCTGGCCA AGCGCGTGCA CCCGGTGCGC ATCCTGATCA GCGCGCAGCT GATGGCCGGT
AGCCTGACCG CTGCCTGCTA CTTCATCGAT TCGCTGCCGC TGTTCTGGGT GGTGTCGCTG
CTGATGGTGG TGTTCAAGGG CAGCTACCTG CTGATGTACC CCTACGTGAT GAGCCTGCAG
CAGCAGGACA ACCACACCCA GACCATCGGC ACGCTGTCGG TGGTGGTGCA CTTCGGCGCC
ATTCTCGGCG CCGCGCTGGG CGGGCTGATC CTGCAGGTGA TGAACATCGG CGACGTGTTC
CTGGTGATGG CCGCCGGCGA CTTCATCCAG ATGGCCATCT GCATGCATCT GGTGCGCGGC
TACCTGCCGG CGCCGGGCGA GCAGCCGGCC AGCGACGAGG CGCCGGTGAA GAACGAGGCG
CGCAGCCTGC CGGCCATCTA CCGCCTGTGC CTGGTAATGC TGCTGTTCTA CTTCGTCGGT
TACGTGACGC GGCCGTTCTT CGCGGTTTAC TGGCAGCAGG TGGCGCACTG GAACAGCGAA
ATGGCCGCCG GCTTCGTCTA TGCACTGCCC GGCGCGGTGG CCGTGGTGGC GCTGTGGTGG
GGGCGCCGCG CGACCAGGCA GGGCAACACC CGTGACGGCA TTCTCGCCGG ATTGCTGCTG
GGCGCGGCGG CCACCTTCAT CCAGGGCTTC GGCGATCAGT GGCTGATCCT GCTCGGCCGC
GTGCTGTTCG GCTGGGCGCT GTATCAGGTC ACCGTGCGTC TCGACGCACT GCTGTTCGAG
CTCAGTTCGC CTGAGCACTA CGCGGTGGAC TTCAGCAAGA TCAACATCTT TCAGTGCCTG
GGCAACATGG GCTCGGCCTA CGGCGCGGGC CTGCTGGTCA GCCATTACGG CCAGGCCATG
CCGTTCTGGG TCGGCGCTGC CGGCCTGCTG GCGACGGCCG CGCTGTTCCC GCTACTGGTG
CGCAAGCCGC GCACGGCCTG A
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| Protein sequence | MTLRTCLIMM TALAVITDNL IIPFYPQYFA ERFDNPPEQH VGLYLAVVSL VVMAVFPLWA
RLAKRVHPVR ILISAQLMAG SLTAACYFID SLPLFWVVSL LMVVFKGSYL LMYPYVMSLQ
QQDNHTQTIG TLSVVVHFGA ILGAALGGLI LQVMNIGDVF LVMAAGDFIQ MAICMHLVRG
YLPAPGEQPA SDEAPVKNEA RSLPAIYRLC LVMLLFYFVG YVTRPFFAVY WQQVAHWNSE
MAAGFVYALP GAVAVVALWW GRRATRQGNT RDGILAGLLL GAAATFIQGF GDQWLILLGR
VLFGWALYQV TVRLDALLFE LSSPEHYAVD FSKINIFQCL GNMGSAYGAG LLVSHYGQAM
PFWVGAAGLL ATAALFPLLV RKPRTA
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