Gene Pmen_3736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3736 
Symbol 
ID5105731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4119919 
End bp4121007 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content68% 
IMG OID640504991 
Productendonuclease/exonuclease/phosphatase 
Protein accessionYP_001189216 
Protein GI146308751 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGT CCCGCCCGTT CCGTCTGCTG CTCATCATCG CTTTGCTGTT CGGCGCCCTG 
TTCGCCCTGT TGCATGGCCT GACCTGGCGC CCCGCCGCAC ACGAGCCGGC GCCGCTGGCC
TGCAACGGCA AGGTGGCGCA GCTGCAGCCG GGCCAGGCGC TCAAGGTGAT GACCTGGAAC
GTGCAGTACC TGGCCGGCAA ACGCCATGTG TTCTGGTACG ACTTGCCGGG CGGCGATGGC
CCGGACGAGC GCCCGAGCAG CGACGATCTG GCCGCCACCC TGGACGAAGT GGTGCGCGTA
CTGCGCGACG AGCAGCCGGA TCTGGTGCTG CTGCAGGAGC TGCACGACGG CGCCAAGGCC
AGCGACTATC AGGACCAGCT GGCCCTGTTG CAGGAACGCC TGGCCGATCT CTACCCGTGC
AGCAGCCAGG CCTTTTACTG GAAGGCCGCG TTCGTCCCGC ACCCGCGCAT CCTCGGCAGC
GTCGGCATGA AGCTCGGCAC CCTGAGCCGC TTCCAGATCG CCCGCGCCGA ACGCCTGCAA
CTGCCGGAAA TCCCCAGCGA CCCGCTGAGC CGCCAGTTCC AGCTCAAGCG CGCCTTGCTG
GTCAGCCACC TGCCGATCCG TGGCGGCGGC GAGCTGGTGG CGATCAATAC CCATTTCGAT
GCCTTCGCTC AGGGCGACGA CACCATGCGG CGTCAGGTGC AGATGACCGA TGCGCTGCTG
CAGCAGCTGC AGGCAGGCGC CAGCCCCTGG ATCCTGGGCG GCGACCTCAA CCTGCTGCCG
CCCGGCCAGT TCCAGCATCT GCCGGAGAAC CAGCGCGGCT GGTACGCCGC CGACAGCGAA
CTGCAGGATC TGGCCGGGCG CTACCCGATG ATTCCCAGCC TGCAGCAGGC CAGCGGCGCA
CAGCAGGCGC AGTGGTACAC CCATTACCCC AACGACCCGG CGGCCAGCGG CCCGGATCGC
ACCCTCGACT ACCTGTTCTA CAGCCCGCGC CTGACGCCCT TCGCCAGCCA GGTGCGCCAG
CACGACACCC TGGGCATCTC CGACCACCTG CCGGTCATCG GTCGCTTCTT TCTGCCCAGC
GAGGAATAA
 
Protein sequence
MSLSRPFRLL LIIALLFGAL FALLHGLTWR PAAHEPAPLA CNGKVAQLQP GQALKVMTWN 
VQYLAGKRHV FWYDLPGGDG PDERPSSDDL AATLDEVVRV LRDEQPDLVL LQELHDGAKA
SDYQDQLALL QERLADLYPC SSQAFYWKAA FVPHPRILGS VGMKLGTLSR FQIARAERLQ
LPEIPSDPLS RQFQLKRALL VSHLPIRGGG ELVAINTHFD AFAQGDDTMR RQVQMTDALL
QQLQAGASPW ILGGDLNLLP PGQFQHLPEN QRGWYAADSE LQDLAGRYPM IPSLQQASGA
QQAQWYTHYP NDPAASGPDR TLDYLFYSPR LTPFASQVRQ HDTLGISDHL PVIGRFFLPS
EE