| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3718 |
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| Symbol | |
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| ID | 5105713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4104410 |
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| End bp | 4105003 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640504973 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001189198 |
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| Protein GI | 146308733 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAGCAC TGCGCGAGGC GCGCCACTGG GTGTTCGACA TGGACGGCAC CCTGACTCTG
GCGGTGCATG ATTTCCCCGC AATCAAGCGG GCGCTGGGCA TTCCTGAAGA AGACGACATC
CTCCATCACC TGGCGGCGTT GCCGGCGGAG GAGGCTGCGG CCAAGCATGC CTGGCTGCTG
GAGCACGAGC GCGAACTGGC CGTGGCCTCA CGCCCGGCGC CGGGCGCCAT CGACCTGGTG
CGCACCCTGT GCGAGCGCGG TTGCCAGCTC GGCATTCTTA CCCGCAATGC CCATGCCCTG
GCCCTGCTGA CTCTGCAAGC CATCGGCCTG GATGACTGCT TCGCCAGGGC GGACATCCTT
GGCCGCGACG AGGCGCCGCC CAAGCCGCAT CCGGGCGGGC TGCTGCATCT GGCCGAGCGC
TGGGCGGTCA AGCCGCAGGA GCTGGTGATG GTCGGCGACT ACCGCTTCGA CCTGGAATGC
GCCCAGGCCG CCGGTGCGCG CAGCGTGCTG GTCAACCTGC CGGACAACCC CTGGCCGGAG
CTGACCGAGC TGCATGCGCA GGATTGCGCG CAGCTGCTGG CCGAACTGAG CTGA
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| Protein sequence | MRALREARHW VFDMDGTLTL AVHDFPAIKR ALGIPEEDDI LHHLAALPAE EAAAKHAWLL
EHERELAVAS RPAPGAIDLV RTLCERGCQL GILTRNAHAL ALLTLQAIGL DDCFARADIL
GRDEAPPKPH PGGLLHLAER WAVKPQELVM VGDYRFDLEC AQAAGARSVL VNLPDNPWPE
LTELHAQDCA QLLAELS
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