Gene Pmen_3708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3708 
Symbol 
ID5105703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4090878 
End bp4092308 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content69% 
IMG OID640504963 
Producthypothetical protein 
Protein accessionYP_001189188 
Protein GI146308723 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCGG CCCTGCAGGC GCTGCCGCGC GCGACCTGGC GTCAGCGCCT GTTGCGGCTG 
ATGCCCTGGC ACCGGCGCCT GGCGATGCTG GCTTGCCTCG GGGTGTTCTG CTGGGCCGGC
AGCGGCATGC TGCATCCGCT GATGGGCTAC CTGCAGCCAC GGGCGCAGAC CATGGCCGCG
CCGCAGCAGG TGGTGCCGCT GGACGACCTG CGCAGTCCTG CGCAGGTGCT CGCCGCTGCG
GCCATCGAGC GGGTGCAGGC GTTGCGCCTG CTGGTGCTGG CCGGCGAGCC CTATTATCAG
GCGCGTCTGC CCGGCGAACT GCAGCCACGC TACTGGCATG CGCGCAGTGG CGAGGTCGTC
GACCTGACTG CGGCGCATGC CGAAAGCCTG GCCCGGCATT ACCTCGGCAG CGAGGAGAGC
CTGACCTACG GCGGCAGCCT CGAGCACTTC GGCAGCGAAT ATGCCTTCAT CAACCGCCTG
CTGCCGGTGG CGCGGGTCGA CACCCGGCGC GAGGACGGCC TGAGGCTGTA TGTCGATCTG
TTCCATGACC GCCTCGGCAC CCTGGTGGAT CAGCGCAAGG CCTGGTTCAG CGCCTTCTTC
CAGACCCTGC ACAGCTTTCG CTGGCTGGAT GCGGCCGGGC CGCTGCGGCC GTTGCTGATG
GCCGTGCTGC TGGCCTCGAT CCTGAGCGCG ACGCTGTTCG GCATCGCGCT GTTCGTGGCG
CGGCGCCGCG CCCGCAGTTT CAGTCGCCGC CTGCATGGCT GGTGGGGGCT GGGCCTGGCT
GCGGCCACCC TGAGCTTCGC CAGCAGCGGC GCCTGGCACC TGCTGCACAA GCAGACGGCA
GAACCCTGGC CTGCCGCCTA CGCGGCGAGT TTCGAGGTGG CTCTGCTGGA TCAGGCGCCC
AGCGCCGATT GGCTGCTGCG CGGCGAGCAG CTGTTCGGCC TGAGCCTGCT GGAACTGGAT
GGCAAGCCGA TCTGGCGCGC CCAGGGGCAG CAGTTCGGCA TGATGCCGAC CCTGCACTAC
CTGGATGCCG CTGGCCGGGA GCTGGATATC GACAGCGCGC GCCGCCATGC CCGTCAGCGT
CTCGAACATT ACGCCGCCGC GCTCGGCCTG GGCGAGATGC AGAGCCTGAC GCTGCAATCG
CAGTTCGATC ACGAGTACGG CTTCGTCTTC AAGCGCCTGC CGGTGTTCAA GGCCACATAC
GCCGATGCGA AACGCACCGC TCTGTATATC GATCCGCTGG ACGGCGCGCT GGCCAGCCGC
GTGCAGGACG CCGACCGCCG CGAGGGCTGG GTGTTCGCCT ACCTGCACAA GTGGGAGTTT
CTCGCCGGCC TGGGCAATGG CTACAAGCAT CTGATGCTGG GCCTGTTTGC GCTGGCGCAC
CTGCTGCTGG CGCTGGTCGG CCTGAGCCTG CTGCGCCGGA GTGCGCGCTG A
 
Protein sequence
MTAALQALPR ATWRQRLLRL MPWHRRLAML ACLGVFCWAG SGMLHPLMGY LQPRAQTMAA 
PQQVVPLDDL RSPAQVLAAA AIERVQALRL LVLAGEPYYQ ARLPGELQPR YWHARSGEVV
DLTAAHAESL ARHYLGSEES LTYGGSLEHF GSEYAFINRL LPVARVDTRR EDGLRLYVDL
FHDRLGTLVD QRKAWFSAFF QTLHSFRWLD AAGPLRPLLM AVLLASILSA TLFGIALFVA
RRRARSFSRR LHGWWGLGLA AATLSFASSG AWHLLHKQTA EPWPAAYAAS FEVALLDQAP
SADWLLRGEQ LFGLSLLELD GKPIWRAQGQ QFGMMPTLHY LDAAGRELDI DSARRHARQR
LEHYAAALGL GEMQSLTLQS QFDHEYGFVF KRLPVFKATY ADAKRTALYI DPLDGALASR
VQDADRREGW VFAYLHKWEF LAGLGNGYKH LMLGLFALAH LLLALVGLSL LRRSAR