Gene Pmen_3704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3704 
Symbol 
ID5105699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4087227 
End bp4087577 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content66% 
IMG OID640504959 
ProductMerR family transcriptional regulator 
Protein accessionYP_001189184 
Protein GI146308719 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCG GAGAACTGGC CGAAGCCTGC GACGTGAGCC GCGACACCTT GCGCTTCTAC 
GAGCAACGCG GGCTGATCGC GGCACGGCGC AGCGCCAACG GCTACCGCGA CTACCCCGCC
GAGATGGTGC AACTGGTCAC CTATATCAAG ACCGCGCAGC GCCTGGGTTT CAGCCTGGGC
GAGATCAGCC AGCATGTCGG CGGCCTGTGG CAGACCGACG ACCCGGATCA CGCCGTGACT
CAACTGCTGC AGGACAAACT GGCACTGATC GAGCGCCGCA TCGACGAGCT GCAGCAACTG
CGAAACGAGC TGCTACAGCG CCTGGCCACC ACCTGCCCGC TGCGCGCCTG A
 
Protein sequence
MRIGELAEAC DVSRDTLRFY EQRGLIAARR SANGYRDYPA EMVQLVTYIK TAQRLGFSLG 
EISQHVGGLW QTDDPDHAVT QLLQDKLALI ERRIDELQQL RNELLQRLAT TCPLRA